Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1923 ATGTTATACTATCTTCCTTTGCAGTTCATGAAACAGGATTACAGGGGTCTTCAACACCTCCGTCATGTAAACAAGTCAACACGTAGATTGTCTTGCAAATCACGATCTTTTAAATGTCATTGTTTTTTAGTGCCAGGCCAACAAATTGTGATTCCTTCTGTTAAAGTGGCTACTAAAGTGCTGACAAGGTGCTGTAACGTGTTACAAAATAGTCAAGTCATTGTAAAGTTGATTCCTGCTATTGGCATTATCATTTTTGCAGTATGGGGTGTTGGTCCATTAATGTTTCAGACAAGGAAACATTGTTTTCAGAGGAGTGATAATAGTTGGAAAAAAAGTACCACTCATTACATAGTAACTTCATACCTTCGACCACTACTATTATGGACGGGAGCCATACTTATTTCCAGATCATTTGAGCCAGTAATTCTACCCACTGAAACTAGCCAGGCTGTTAAGGAACGACTTCTGAGTTTCGTTAAATCATTGTCGACTGTAGTGGCTTTTGCCTATTGTTTATCTAGTGCAATTCAACAAGCACAAAAATTTGTAACAGAGAATGCAGATGCAAGTCAGACAAGAAATATGGGGTTCCAATTTGCAGGCAAAGCTGTTTATTCTGCTGTATGGATTGCTGCCTTTTCATTATTTATGGAATTGCTGGGCTTCTCTACCCAGAAATGGGTTACTGCAGGAGGTTTTGGGACAGTTTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGCGTGATGATTCACGCAACTCGGCCTTTTGTGGTAAATGAATGGATTCAAACAAAGATTGAAGGATATGAAGTTTCTGGCACTGTTGAGCATGTTGGCTGGTGGTCCCCAACAATTATACGAGGCGAAGATGGTGAAGCTGTACACATTCCAAACCACAAATTTACGGTGAATGTCGTACGGAATCTCAGTCAAAAAAAACATTGGAGAATCAAAACTCACCTAGCAGTTAGTCATTTGGATGTAAATAAGATCAATAACATTGTTGCTGACATGCGAAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAAGTTGCACAGGAGAGTGTTTTTGGACAATATAAACCCTGAAAATCAGGCTCTCATGATTCTGATTTCTTGTTTCGTCAAGACTTCACATTTTGAAGAATATTTGTGTGTTAAGGAAACTGTACTATTGGATCTTCTTAGAGTTATCAGCCATCACCGAGCCCGGCTTGCAACACCAGTCCGTACCATACTGAAAGTATATAGTGATGCCGACTTGGACAACATACCATACGCAGATTCTGAAACAGTATCTAACCGCCCATTATTAGTGATTGAATCGCCTTACAAGAACAATGCAGATGATAAAACGAAAAGTCGATCAACACGTACAGCTGTTGATCAAGATAACAAGACAACTGTGCAAACCAAACTTGATGTCAAGACAGACAAGGTTGGACCAATAGGAGCACCAGATACCAAGGTTAGAGAAACTCAAGATAACTCTGAGGTGGACGCCAAAGTCATGGCATCTAACTCTGATGCAAATGGAAACTTTAAACCTGACTCTGAAGTGGGTGAACACAAGCCACCGAAATCAAATTTAAACAAGGAAAACGTGGAGGTGCCAGAAATATCTTATAATTCCAACTCCAAAGTAACTGGTTTGGAATTAGATTATTCATCCCAGAAGGACATCCATGTGAAACAATCTAAGGGAAGGAGAAAGGAAACCCGCATCAACTCAGAGAATCTAGTTTCCTCATCGACAAACAACACTGACAAATCCAATGGAAACATGCCAACAAAACAGGAAGGAGAAAGGAAACCCGCCGTATCCAGGCCTGTTCTTGAAGAAAATATTGTACTTGGCGTTGCATTGGAGGGATCAAAGAGGACACTTCCTATTAATGAGGAAACTGACACTGTGACAACTCAAGAGAACAAGGAAATGGCTGCATTTCAGGGTGGAAATGAATCCCCAAAGCCTTCAGATGGGAATGTAAAGTAA 2019 0.4012 MLYYLPLQFMKQDYRGLQHLRHVNKSTRRLSCKSRSFKCHCFLVPGQQIVIPSVKVATKVLTRCCNVLQNSQVIVKLIPAIGIIIFAVWGVGPLMFQTRKHCFQRSDNSWKKSTTHYIVTSYLRPLLLWTGAILISRSFEPVILPTETSQAVKERLLSFVKSLSTVVAFAYCLSSAIQQAQKFVTENADASQTRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGFGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDGEAVHIPNHKFTVNVVRNLSQKKHWRIKTHLAVSHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLDNINPENQALMILISCFVKTSHFEEYLCVKETVLLDLLRVISHHRARLATPVRTILKVYSDADLDNIPYADSETVSNRPLLVIESPYKNNADDKTKSRSTRTAVDQDNKTTVQTKLDVKTDKVGPIGAPDTKVRETQDNSEVDAKVMASNSDANGNFKPDSEVGEHKPPKSNLNKENVEVPEISYNSNSKVTGLELDYSSQKDIHVKQSKGRRKETRINSENLVSSSTNNTDKSNGNMPTKQEGERKPAVSRPVLEENIVLGVALEGSKRTLPINEETDTVTTQENKEMAAFQGGNESPKPSDGNVK* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1923 672 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 5 672 IPR045042 -
Psa2g1923 672 MobiDBLite consensus disorder prediction 451 551 - -
Psa2g1923 672 Gene3D - 262 317 IPR023408 -
Psa2g1923 672 Gene3D - 159 260 - -
Psa2g1923 672 MobiDBLite consensus disorder prediction 454 468 - -
Psa2g1923 672 MobiDBLite consensus disorder prediction 507 522 - -
Psa2g1923 672 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 5 672 - -
Psa2g1923 672 SUPERFAMILY Sm-like ribonucleoproteins 246 316 IPR010920 -
Psa2g1923 672 Pfam Mechanosensitive ion channel 203 410 IPR006685 GO:0016020|GO:0055085
Psa2g1923 672 MobiDBLite consensus disorder prediction 639 656 - -
Psa2g1923 672 MobiDBLite consensus disorder prediction 567 584 - -
Psa2g1923 672 MobiDBLite consensus disorder prediction 585 603 - -
Psa2g1923 672 MobiDBLite consensus disorder prediction 524 538 - -
Psa2g1923 672 MobiDBLite consensus disorder prediction 567 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1923 Psa-Chr2 177130003 177140712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1923 32 668 Mechanosensitive Ion Channel Family AT5G10490 55.796 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1923 K22047 - gmx:100789444 996.882