Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1873 ATGGTTCCAAGTGATATTAATGGATTCAATTATATAGCTCCTCTTGAGAATTCATTCCAAATTCCCCAAAACTATGTCTTGCCACAAAGTGAAATACCAAATTTTCATCTAAATAATCTCTTAAGCACTTTACCAAACTACCATTACCCATCATCAGCAGCAGGGCATGAATTTGCACCTCCTTCATGTCTAAGCAGCAACTCAACTACTTCCGATGAAGCCGATGAACTTCAGTTCAACAACGTGATCGACGAAAGGAAGCACCGACGAATGATATCGAACAGAGAATCAGCCAGGAGATCAAGAATGAGGAAACAAAAACACTTGGATGAACTCTGGTCACAAGTGGTAAGACTCAGAACTGAGAATCATAATCTTGTTGACAAACTCAATCATGTTTCTGAGTCACATGACAGAGTTGTTCAAGAAAATGCACGCCTTAAGGAAGAGACTTTCGATCTTCGCCAAATGGTAGCTGATATGCAAATTGGCAACTCTTTTCCTTGCAACATGGAAGATTTTTCTGAAATTCCATGCAACACCACATCACAACTCAATGACGATGATTCCTCAAAACCAATCAATTCCACATGA 594 0.3939 MVPSDINGFNYIAPLENSFQIPQNYVLPQSEIPNFHLNNLLSTLPNYHYPSSAAGHEFAPPSCLSSNSTTSDEADELQFNNVIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLVDKLNHVSESHDRVVQENARLKEETFDLRQMVADMQIGNSFPCNMEDFSEIPCNTTSQLNDDDSSKPINST* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1873 197 Pfam bZIP transcription factor 86 135 IPR004827 GO:0003700|GO:0006355
Psa2g1873 197 SUPERFAMILY Leucine zipper domain 86 136 IPR046347 GO:0003700|GO:0006355
Psa2g1873 197 PANTHER BZIP PROTEIN (ATBZIP48) 1 194 - -
Psa2g1873 197 CDD bZIP_plant_GBF1 87 138 IPR045314 GO:0003700|GO:0006355
Psa2g1873 197 Coils Coil 130 150 - -
Psa2g1873 197 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 89 104 IPR004827 GO:0003700|GO:0006355
Psa2g1873 197 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 147 IPR004827 GO:0003700|GO:0006355
Psa2g1873 197 Gene3D - 84 141 - -
Psa2g1873 197 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 194 IPR044521 -
Psa2g1873 197 SMART brlzneu 82 146 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1873 Psa-Chr2 164884715 164885814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1873 63 177 bZIP Transcription Factor Family AT3G30530 68.966 2.49e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa2g1873 bZIP_1 3.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1873 - - gmx:100778078 272.707