Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1854 ATGGCTGAAAGCTTTGACAGTGCTACATCTAATCTTCTATGTTCTGAAACCAATAGCACATGCTTTGATGAGGATTTGGAATGCAATGGTGCTGTTGATGGTTCTGGAATCTCAACTTCATGGGACCACATGAACCTTAACTTGGACAACTTGGACAACTTGGACAACGTTGGATCGGAATCATTTGTGTGTTTTGTTGCACAGAGTGAGGAAATTGTGAGGGTTATGGTTGAGAAAGAGATTGAACATTTGCCTAGAGAGGATTATTTGATGAGATTGCGAAGTGGTGACTTGGATTTGAGTGTTAGAAGAGAGGCTCTTGATTGGATTTGGAAGGCTCATGCTTATTATGGATTTGGACCATTGAGTCTTTGCTTATCGGTGAACTACTTGGATCGGTTCTTATCGGCTTATCAATTACCGAGAGGTGTGAGTTGGACTGTGCAATTGTTAGCTGTGGCATGCTTTTCACTTGCGGCTAAAATGGAAGAAGTTAAAGTGCCGCATTGCATAGATTTACAGGTCGGAGAACCGAGATTTGTGTTCCAAGCTAAAACAATTCAAAGAATGGAACTAATGATATTAAGCACATTAGGATGGAAAATGCATGCCTTAACTCCTTGTTCCTTCATAGACTACTTCATATCTAAGATCAGTTGCGAGAATCAAGCCGGAAAGTCATTGATTGCGAGATCAGTGCAACTCATTCTTAACATAATCAAGGGTATTGATTTCTTGGAGTTCAGGCCTTCTGAAATTGCTGCAGGGGTAGCAATTTCTGTTTTGAAGGAACTGCCGGGGCATGAAGTCGATAAGGCCATAGCCGATTTCGTCATTGTAGATAAGGAGAGAGTTCTAAAGTGTGTTGAATTGATAAAAGATCTATCCTTGATCAAGGTAGGTGCATCTAAGTATACACCATTTGTGCCTCAAAGTCCTATAGGGGTGCTTGATGGAGGGTGCATGAGTTTTAAGAGTGATGAGTTAACAAATGGGTCATATCAAAATTCTTTACAAAATAGTCCAAATACTAAAAGGAGAAAATTTGATGGACCTTCCAATGGATAA 1068 0.4017 MAESFDSATSNLLCSETNSTCFDEDLECNGAVDGSGISTSWDHMNLNLDNLDNLDNVGSESFVCFVAQSEEIVRVMVEKEIEHLPREDYLMRLRSGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSAYQLPRGVSWTVQLLAVACFSLAAKMEEVKVPHCIDLQVGEPRFVFQAKTIQRMELMILSTLGWKMHALTPCSFIDYFISKISCENQAGKSLIARSVQLILNIIKGIDFLEFRPSEIAAGVAISVLKELPGHEVDKAIADFVIVDKERVLKCVELIKDLSLIKVGASKYTPFVPQSPIGVLDGGCMSFKSDELTNGSYQNSLQNSPNTKRRKFDGPSNG* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1854 355 Pfam Cyclin, C-terminal domain 206 303 IPR004367 -
Psa2g1854 355 PANTHER CYCLIN-D4-1-LIKE 1 350 - -
Psa2g1854 355 SMART Cyclin_C_2 205 328 IPR004367 -
Psa2g1854 355 MobiDBLite consensus disorder prediction 333 355 - -
Psa2g1854 355 ProSitePatterns Cyclins signature. 103 134 IPR006671 -
Psa2g1854 355 Gene3D - 86 203 - -
Psa2g1854 355 SMART cyclin_7 108 196 IPR013763 -
Psa2g1854 355 Gene3D - 76 291 - -
Psa2g1854 355 CDD CYCLIN 103 195 IPR013763 -
Psa2g1854 355 SUPERFAMILY Cyclin-like 62 203 IPR036915 -
Psa2g1854 355 PANTHER CYCLINS 1 350 IPR039361 -
Psa2g1854 355 Pfam Cyclin, N-terminal domain 71 202 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1854 Psa-Chr2 160792026 160794795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1854 67 265 Core Cell Cycle Gene Families AT5G65420 61.692 5.76e-88 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1854 K18810 - gmx:100794010 479.174