Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1825 ATGGATGGGAACCCTAACTCTTCCGAACTTCTCCGCCAATTTCAAGCAGCTCTCAAACGCCCCCGACCTCCTGGTGGTGCCTCGCAACCCAATATCATGCGGCCAAAACGTTCTGCTGCTGCTGAAGCAAAGGCAATGGCCATGAGTAATTCTCAGGACTCTCAATCCAGTCTGGATCAATCGGGGAATCACTCCCTTTCTTTTCCAGATGAAATGAAGTGCTTGCGAAGCAGCGTGCCTGAAGCATCAACCGGAAGCAATCAAGATTTGAAGCCCAAAATATTTCAGCAGGCAGAGTCTAAAAAGAGTTTGATATCCGATGGAGGAAAAGTTTCTATATTGCCAAGGAGAACAATAATTACTCAAGATCATTTGCATAAATTCAAAAACTTTTTAAGCCAACCAGCTACACAATCTTCTGTAGTTGGCCCCTCGTGTGCAACAACTACATCAGTCCATTCAAGTTCGGCTCCCATGCTGAATTCTTTAACCGGTTCTTCTCATTCCCATCCAAATAGTGCCTCAAATTTGGTTGCAAAATGTTGTGGGAACCTTAATCCTCGTCCAATAACTCATGGGGTTATTAAGTCGGAAAATACTAACCTAAAAGAAACCAATAGAATATCAACAGATCAAGCAACTACTGCAGTCCAAGCTTGTAGTTCACTTACTGATGCTGAATTGACATTTAAGGAGAGCAACCCACCTAAAGAGCTGCAAGGAAGCGTTGCAAAGGAAACTAGTATTTCGAATAATGTTGTTTCCTGTAATGACCATGCGTTAACTAAAGGAAAAGACTCTGCAGTTACTACCAACACACAGCCCGAGGCTCCAACTGTATCTTCAGAAGTGAAGTTGGAGTCTTCAAAGTTAGGTAAAACAGAGAAAGATAAAGCTGCTCGGAAAATGACCTATAACCCTGTTTCGTTTTTCAAAGTTAGTGGCAAGTTATATCAAAGGCTTGGAAGAATAGGTACAGGAGGAAGTAGCGAGGTACACAAAGTGATTTCATCAGAATGTACAATCTATGCGCTTAAAAAGATAAAACTAAAGGGTCGTGATTATGCCACTGCATATGGATTTTGTCAAGAGATTGAGTATCTATACAGACTGAAAGGAAAAAGTAATATTATACAGCTTATAAATTATGAGGTGACTGACAAGGCTTTGCTTGAGGGAGTCATGAAAGGCTCTTTCAACAATAAGGGTGGTAAAGTCAAGGATGATGGATTTATATACATGGTGCTTGAACACGGGGAAATTGATTTGGCACATATGTTGTCTCAGAAGTGGAAGGAACTGGATGGGTGCAACCAAACCATAGATGAAAACTGGCTTAGGTTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATCCATGAGGAACGTATTGTGCATTCTGACTTGAAGCCTGCAAATTTCCTCCTTGTCAAAGGTTCCCTCAAATTGATCGATTTTGGAATAGCTAAAGCAATAATGAGTGATACAACAAACATCCAGCGGGATTCACAGGTTGGCACTCTAAACTATATGTCACCAGAAGCATTTATGTGCAACGAGAGTGATGCGAATGGCAACATCATAAAGTGTGGTCGGTCATCAGACATTTGGTCCTTAGGTTGCATCCTGTATCAAATGGTATATGGGAGAACACCTTTTTCAGATTACAAGACATTTTGGGCCAAAGTCAAAGTGATAACTGATCCAAAACATCAAATTACATATGAACCAGTTTCAAACCCATGGCTCGTGGATCTTATGAAGAAGTGTCTTGCATGGGATCGGAATGAAAGGTGGAGAATTCCTCAGTTACTCCAACACCCTTTTCTTGCTCCTCCAGTTTCATGTCATCCTTCTTTGTCCCAAGGTCATACCTTTAAATGGCTGCAACTTATTACGGAAACTGGTACGCATGATCAAGAAGCTTTGCAGCTTTGTTGTCAGCTCCAACAGGTGCTTGGCGACCCCTTTAAGTTGGTAACTCCTGACAGTTTAGATTCGCGAGACGGACAATGCAAGTTGTTGTCCCGTATATCAGAACTCTGTTTTCAGCTGCAAGAACGATTAGCGAATTCTGATAAAAATTCTGATAACAAGTAG 2103 0.4146 MDGNPNSSELLRQFQAALKRPRPPGGASQPNIMRPKRSAAAEAKAMAMSNSQDSQSSLDQSGNHSLSFPDEMKCLRSSVPEASTGSNQDLKPKIFQQAESKKSLISDGGKVSILPRRTIITQDHLHKFKNFLSQPATQSSVVGPSCATTTSVHSSSAPMLNSLTGSSHSHPNSASNLVAKCCGNLNPRPITHGVIKSENTNLKETNRISTDQATTAVQACSSLTDAELTFKESNPPKELQGSVAKETSISNNVVSCNDHALTKGKDSAVTTNTQPEAPTVSSEVKLESSKLGKTEKDKAARKMTYNPVSFFKVSGKLYQRLGRIGTGGSSEVHKVISSECTIYALKKIKLKGRDYATAYGFCQEIEYLYRLKGKSNIIQLINYEVTDKALLEGVMKGSFNNKGGKVKDDGFIYMVLEHGEIDLAHMLSQKWKELDGCNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLNYMSPEAFMCNESDANGNIIKCGRSSDIWSLGCILYQMVYGRTPFSDYKTFWAKVKVITDPKHQITYEPVSNPWLVDLMKKCLAWDRNERWRIPQLLQHPFLAPPVSCHPSLSQGHTFKWLQLITETGTHDQEALQLCCQLQQVLGDPFKLVTPDSLDSRDGQCKLLSRISELCFQLQERLANSDKNSDNK* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1825 700 SMART serkin_6 318 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1825 700 Pfam Protein kinase domain 318 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1825 700 Gene3D Phosphorylase Kinase; domain 1 311 397 - -
Psa2g1825 700 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 8 658 IPR027084 GO:0004712|GO:0007093|GO:0051304
Psa2g1825 700 MobiDBLite consensus disorder prediction 45 63 - -
Psa2g1825 700 CDD PKc_Mps1 316 611 - -
Psa2g1825 700 Gene3D Transferase(Phosphotransferase) domain 1 433 616 - -
Psa2g1825 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Psa2g1825 700 SUPERFAMILY Protein kinase-like (PK-like) 308 619 IPR011009 -
Psa2g1825 700 ProSiteProfiles Protein kinase domain profile. 318 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1825 700 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Psa2g1825 700 MobiDBLite consensus disorder prediction 1 63 - -
Psa2g1825 700 PANTHER MIXED LINEAGE PROTEIN KINASE 8 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1825 Psa-Chr2 155375671 155380781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1825 319 611 MAP Kinase Kinase Gene Family AT3G21220 27.393 1.09e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Psa2g1825 Pkinase 1.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1825 K08866 - gmx:100795003 931.784