Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1817 ATGTCTAGCTCAAGAGATTCATGGCAGCTCATTTATGGTGATGATTGGGATTCACCTGTATACAATTCAATCCACCATCCTTATCTAGTTACAGCAGTTTGTATCACAGGGTGCATCAGTCTTGGTATAATGAACCAACCTGGCTTTGAACAGGAGCAGGCTGGTAAAAGGCCAAGAGCACAATGCAAAACACCTACTAAGTCAAACTACACATCATGGTTCGGGTCCAAACCAGTTTCAACCTGGCCTACCACATCCTTCAACCAAAATCAAACATGTCCTGCAGCATTTAACCACCACTTCAATCCAATTCTCTTCATCCTTCAATCCACAACAATTCCACCGAAACACAACCGTAACAAGCAAACCTCCATAACCACCGCCACACCTCACCAACAGAATCCATCAACGCGGAACGGAAGTGCGCGAAGAACGAATCAGCAACTAGTGATTCCTTTCTCGGAGCTGGAGAGGCTGAACCGGATCGGAAGCGGTAGCGGAGGAACGGTTCACAAAGTAGTTCACAGAATCAACGGCCGCGCTTACGCTTTGAAGGTGACTTACGGTCATCACGAGGAATCTGTCCGTCCTCACATCGTTCATAGAGACATCAAACCATCGAATCCGTTGATCAACTCGCGGAAACAGGGTAAGATCGCTGACTTCGGTGTTGGTAGAATTCTGAATCAAACGATGGATCCGTGTAATTCATCGGTAGGAACGCTTGCTTGCATGTCACCGGAGAGGGTAAACACCGATATCAACGACGGACAATACGATGCTTACGCCGGTGACATATGGAGTTTCGGTGTGAGTATATTGGAGTTTTACAGGGGAAGATTTCCGTTTGCGGTTGGTAGACAAGGTGATTGGGCAAGTTTGATGTGTGCTATTTGTATGTCGCAACCACCGGAAGCTCCGCCAAGTGCTTCGCCGGAGTTTAGGGATTTCGTTTCGCGGTGTTTGCAGAGAGATCCGTCGAGGAGATGGACTGCTTTGAGGTTGCTTTCGCATCCTCTTCTTACTCGAACGGTTTCTCCACCGTTGGGCTAA 1053 0.4777 MSSSRDSWQLIYGDDWDSPVYNSIHHPYLVTAVCITGCISLGIMNQPGFEQEQAGKRPRAQCKTPTKSNYTSWFGSKPVSTWPTTSFNQNQTCPAAFNHHFNPILFILQSTTIPPKHNRNKQTSITTATPHQQNPSTRNGSARRTNQQLVIPFSELERLNRIGSGSGGTVHKVVHRINGRAYALKVTYGHHEESVRPHIVHRDIKPSNPLINSRKQGKIADFGVGRILNQTMDPCNSSVGTLACMSPERVNTDINDGQYDAYAGDIWSFGVSILEFYRGRFPFAVGRQGDWASLMCAICMSQPPEAPPSASPEFRDFVSRCLQRDPSRRWTALRLLSHPLLTRTVSPPLG* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1817 350 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 197 343 - -
Psa2g1817 350 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 118 199 - -
Psa2g1817 350 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 197 343 - -
Psa2g1817 350 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 118 199 - -
Psa2g1817 350 Gene3D Transferase(Phosphotransferase) domain 1 174 347 - -
Psa2g1817 350 MobiDBLite consensus disorder prediction 117 146 - -
Psa2g1817 350 ProSitePatterns Protein kinases ATP-binding region signature. 162 185 IPR017441 GO:0005524
Psa2g1817 350 ProSiteProfiles Protein kinase domain profile. 1 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1817 350 SUPERFAMILY Protein kinase-like (PK-like) 135 345 IPR011009 -
Psa2g1817 350 Pfam Protein kinase domain 198 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1817 350 SMART serkin_6 156 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1817 Psa-Chr2 154724121 154729162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1817 196 348 MAP Kinase Kinase Gene Family AT3G21220 75.163 6.68e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Psa2g1817 Pkinase 1.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1817 K13413 - gmx:100786390 272.322