Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1808 ATGGATTTTTACGATCGAACCAGCTTTAGAGTTGAAGGAGTCGAGGGCGAGTTCGATATTATTTGTCGGAGCCTCGTGCTTAGCGGACCGGAGGATTTCTCGATTCCGGCGGCGGCTTGGGAAGCGATGAAGGTTCGATCTTTGTCTGATGTGTTACCGAGGTTGAATATTTCGGAATTCGATGAAACGAAGGTGGATGATGAAATTGTAGTAGCAGAGTGTGATGATAGGGTTTCAATTTCAGTTAGAGATTCTCCCGCTGAGACTAGCGGTTGCTGCATCATAGGTGATGGTGGTGGAAAAGATAGGGTTCAGATTATGGGTTTTGATGAGGCTAGCAGTTGCTATACCGGCGGCGAAAATAGGGTTCCGATGAGGGATGTTGATGAGATGAGTGGTTGTTTAAATACTGGCGGTGGAGGTATTAAAGGATTTAGACCTCCGATGCTTAAGCCGCCACCAGGAGTTAGGGGGAAGGAAAAGGAAAAGAAAAAGAAGAAGAGGAAGGGAAAAAACGACGGAGAAGAAGGGGAAGGGGAAGTGGGTGATGTGATATTGAAGAGAGATGAGGAGGAAAATGTTGAGATTATTGGTGAGTTTTCGAGGTCGTGTTCCTTCACTACCTTCACTACTTCACAAGAAGATGATTCATCTAGCACTACAACGGAGCCTAGGTCCAATAGTATATCTCCTAATGTGAGATTGAAACCTGTTATCATTCCTGGTAGCTGGCAAAAGGGTGAGCTTTTGGGGCGCGGTTCATTTGGATCTGTATATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTAAAACAAGTATCACTGCTTGATCAAGGGAGTCATGGAAAGCAAAGTGTTGTTCAACTGGAGCACGAAATTGCACTTTTGAGTCAGTTTGAACATGAGAATATAGTTCGATACATTGGCACTGAAATGGATGAATCAAATCTATATATCTTTATCGAGTTTGTAACCAAAGGTTCCCTTTTAAGCCTCTACCGGAGGTATAAATTTCGAGATTCCCAAGTATCTGCTTATACAAGACAAATTCTCAACGGTTTAAAGTATCTTCATGATCGCAATATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTTGACGCAAATGGGTCTGTCAAGGTTGCGGATTTTGGATTGGCAAAGGCAATTAAATTGAATGATGTTAAATCATGCCAGGGAACAGCATTCTGGATGGCACCAGAG 1230 0.426 MDFYDRTSFRVEGVEGEFDIICRSLVLSGPEDFSIPAAAWEAMKVRSLSDVLPRLNISEFDETKVDDEIVVAECDDRVSISVRDSPAETSGCCIIGDGGGKDRVQIMGFDEASSCYTGGENRVPMRDVDEMSGCLNTGGGGIKGFRPPMLKPPPGVRGKEKEKKKKKRKGKNDGEEGEGEVGDVILKRDEEENVEIIGEFSRSCSFTTFTTSQEDDSSSTTTEPRSNSISPNVRLKPVIIPGSWQKGELLGRGSFGSVYEGISEDGFFFAVKQVSLLDQGSHGKQSVVQLEHEIALLSQFEHENIVRYIGTEMDESNLYIFIEFVTKGSLLSLYRRYKFRDSQVSAYTRQILNGLKYLHDRNIVHRDIKCANILVDANGSVKVADFGLAKAIKLNDVKSCQGTAFWMAPE 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1808 410 MobiDBLite consensus disorder prediction 208 230 - -
Psa2g1808 410 MobiDBLite consensus disorder prediction 140 183 - -
Psa2g1808 410 SMART serkin_6 244 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1808 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Psa2g1808 410 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 410 - -
Psa2g1808 410 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 4 410 - -
Psa2g1808 410 Pfam Protein kinase domain 245 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1808 410 ProSitePatterns Protein kinases ATP-binding region signature. 250 272 IPR017441 GO:0005524
Psa2g1808 410 MobiDBLite consensus disorder prediction 169 183 - -
Psa2g1808 410 Gene3D Transferase(Phosphotransferase) domain 1 243 410 - -
Psa2g1808 410 SUPERFAMILY Protein kinase-like (PK-like) 222 410 IPR011009 -
Psa2g1808 410 ProSiteProfiles Protein kinase domain profile. 244 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1808 Psa-Chr2 153694769 153700217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1808 1 410 MAP Kinase Kinase Kinase AT4G08500 45.916 1.58e-101 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa2g1808 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1808 K13414 - gmx:100819177 448.358