Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1802 ATGCAAACCTTCAAAACTGCTCAATCAAACTCTCAACTCTATTGCCACCAGTCCTTCTTACTTCGGGGAGACGATATAAATAGAAACCAGATGCGCTTTTCTGATCTTGGAGATTTTCACCATTGTTCTCCTTTCTTTCAACAACAAGATGCTCTTGATTTAACTTCAACTTGTATGTTTAACAGTGTAAAGTCCAACAATCTTGTTATTGGTGCTAGTAACATGCATTATGGAACAACAATCAATACGAATGTTGGTTCTGCGGAGATAGCTTCAAATGGCGCAGGATGTTCGGAAGCAGGGCAGCAGCAGCAACTGATGTACAGCAAGGGAATAACTTCCTTGCCTTTGGGGAATAGTCATGTTGAGAATTGGGCTGATTCTGGAATGGCTGATAATAGCCAACAGACTGATGATAATTCTACTGATATTGATATTGATACTGATGATAAACACCAATCCAATAGAGGAAATGCTCACTCCAAGGATCAGACAAAGTTCAGAGCTGAAGATCACAAGACACTTCGTAGACTTGCTCAGAATCGCGAGGCGGCAAGGAAGAGCCGATTACGGAAGAAGGCTTATGTTCAGCAGCTGGAGAGCAGCCGAGTCAAGCTTGTGCAATTAGAGCAAGAGCTTCAACGAGCACGTCAACAGGGCATCTTTATTGCAAATTCTGGAGATCAAGGTGCCTTGGCATTTGATTTGGAATATGGGCACTGGGTTGACGAGCACCAACGTCTGCTCAATGATCTAAGATCTGCATTAAATTCTCAAATGGGTGACAATGAATTGCATCTTCTTGTTGATGGTGTTATGTCACATTACAACGAATTATTCAGGTTAAAGAAAATAGGGGCAAAGGCAGATATATTTCACATGCTTTATGGGCTGTGGAAGACACCGGTAGAAAGATTTTTTATTTGGCACGGTGCATTCCGTTCATCAGAACTTCTTAAGATAGTCAAGAGCCATCTGGAGCCGTTAACCGAAAATCAAATGGTGGGAATTTGTAATCTGCAGCAGTCTACACAGCAGGCTGAGGATGCATTATCACAAGGCATGGAAGTATTGAAACAATCTCTTTTAGAAATACTTTCTTCTACCTCTTCGGTAGCTAGCACTGGTTCTGGAAATGTTGCTGATTACATGGGCCAAATGGCATTTGCAATGAGCAAGCTTGCATCACTCGAGGAATTCCTTCATCAGGCTGACCTCTTGAAGCAAGAAACTCTGCAACAGTTGCAAAGAATTTTGACAACGCGCCAGACGGCTCGGGCTCTCCTTGTCCGAAATGATTACATTTCAAGACTAAGAGCACTTAGTTCTTTATGGCTAGCTCGCCCAAGGGAGTAA 1356 0.4255 MQTFKTAQSNSQLYCHQSFLLRGDDINRNQMRFSDLGDFHHCSPFFQQQDALDLTSTCMFNSVKSNNLVIGASNMHYGTTINTNVGSAEIASNGAGCSEAGQQQQLMYSKGITSLPLGNSHVENWADSGMADNSQQTDDNSTDIDIDTDDKHQSNRGNAHSKDQTKFRAEDHKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLVQLEQELQRARQQGIFIANSGDQGALAFDLEYGHWVDEHQRLLNDLRSALNSQMGDNELHLLVDGVMSHYNELFRLKKIGAKADIFHMLYGLWKTPVERFFIWHGAFRSSELLKIVKSHLEPLTENQMVGICNLQQSTQQAEDALSQGMEVLKQSLLEILSSTSSVASTGSGNVADYMGQMAFAMSKLASLEEFLHQADLLKQETLQQLQRILTTRQTARALLVRNDYISRLRALSSLWLARPRE* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1802 451 PANTHER TRANSCRIPTION FACTOR TGA9 38 451 - -
Psa2g1802 451 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Psa2g1802 451 Gene3D - 172 222 - -
Psa2g1802 451 Pfam Seed dormancy control 249 323 IPR025422 GO:0006351|GO:0043565
Psa2g1802 451 ProSiteProfiles DOG1 domain profile. 231 448 IPR025422 GO:0006351|GO:0043565
Psa2g1802 451 CDD bZIP_HBP1b-like 173 224 - -
Psa2g1802 451 SUPERFAMILY Leucine zipper domain 173 216 IPR046347 GO:0003700|GO:0006355
Psa2g1802 451 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 215 IPR004827 GO:0003700|GO:0006355
Psa2g1802 451 MobiDBLite consensus disorder prediction 148 170 - -
Psa2g1802 451 Pfam bZIP transcription factor 172 211 IPR004827 GO:0003700|GO:0006355
Psa2g1802 451 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 38 451 - -
Psa2g1802 451 SMART brlzneu 169 232 IPR004827 GO:0003700|GO:0006355
Psa2g1802 451 Coils Coil 192 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1802 Psa-Chr2 152547253 152551032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1802 3 451 bZIP Transcription Factor Family AT1G68640 52.854 1.83e-148 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa2g1802 DOG1 8.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1802 K14431 - gmx:100797393 588.186