Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1793 ATGAACATGGACATAGACATAGACATGATCATGGGTATGGATGTAGTCCCCGATTTCCTACCGTTTTCCAATCACAGTCACACTACAACCACACCCACTTCCGAAGACGATAACTTAAACAACACATGGTCCCCTCTCCTCGATTTGGATTTCTTCACCGCCAACCAAGATCACTTCCACGGTTTCATTGATTCCCTCACCAACCATGAAATCAAATCCGTTGATCCAAATCTCATTATCCCTGTCTCCGAGGAGGAGGAGGAATCATCCATTGGAAACGGATCAGACACCGACCCCGATGACAGAAAAGGCCTCCGTCTTGTTCACCTCCTTATGGCCGCGGCGGAGGCTCTAACAGGCACCAACAAGAGCCACAATCTGGCTCAAGTGATATTGATTCGGCTCAAAGACTTAGTGTCTTCCACTCACGGCACCAACATGGAGAGACTCGCCGCGTATTTCACGGACGCTCTACAAACTTTACTCAACGGCACCGACTTTGCACACAACTCCACCAACCACCCCCACCTCAAGCCTTCCTCACTCACTGGACCCCATCAAACAGACCTACTCTCGGCGTTTCAGCTTCTTCAAGACATGTCCCCTTACATCAAGTTCGCTCACTTCACGGCCAACCAAGCCATCCTCGAAGCCGTTACACACGAACGTAGGGTTCACATCGTAGACTACGACATCATGGAAGGAGCCCAATGGGCTTCACTCATTCAATCACTTTCGTCACGGAAAGACGGCATCCCAGGCCCACATCTCCGCATCACGGCATTGTCTAGAAACAAGGAGCGTGGAAGTGGACGGAGATCCATTGCTACCGTTCAAGAAACCGGAAAAAGATTAACGGCGTTTGCAGCTTCCGTTGGACAGCCGTTTACTTTTCATCAATGTAGATTGGAATCAGACGAAACGTTTAGAACTTCTTCGTTGAAGCTTGTTCGTGGTGAGGCTTTGGTGTTTAACTGTGTGATGAACTTGCCTCATCTTAGTTACCGGGCTTCAGATTCCGTTGCTTCGTTTTTGAACGGTGCGAAGGAGTTGAGATCGAAGCTTGTGACGTTAGTTGAGGAGGAGGTTGGGCCCATCAATGATGCGGGCTTTGTGGGCTTGTTCATGGATTCGTTGCATCGATATTCAGCGATGTATGATTCGCTTGAGGCTGGGTTTCCGATGAATAAGTGGGCCCGGGCTTTGGTAGAGCAAGTGTTTATGGGCCCAAGGATAATTGGCTCTGTAGCGCAACTCTACATGACTGGTGAAGAGGAGGGGCAAGAGAAGGGTTCTTGGGGGGAGTGGTTGGGTGCGGAGGGGTTCAGGGGAGTTAACGTAAGCTACGGTAATCATTGCCAAGCGAAGCTGTTATTGGGTTTGTTTAATGATGGGTATAGGGTGGAGGAATTGGGGAACAATAAGTTGGTGTTAGGTTGGAAATCAAGGCGTTTACTTTCTGCTTCTATTTGGGCTTGTAACTCAGAGTCAGAATCTCATTTTTAG 1506 0.4887 MNMDIDIDMIMGMDVVPDFLPFSNHSHTTTTPTSEDDNLNNTWSPLLDLDFFTANQDHFHGFIDSLTNHEIKSVDPNLIIPVSEEEEESSIGNGSDTDPDDRKGLRLVHLLMAAAEALTGTNKSHNLAQVILIRLKDLVSSTHGTNMERLAAYFTDALQTLLNGTDFAHNSTNHPHLKPSSLTGPHQTDLLSAFQLLQDMSPYIKFAHFTANQAILEAVTHERRVHIVDYDIMEGAQWASLIQSLSSRKDGIPGPHLRITALSRNKERGSGRRSIATVQETGKRLTAFAASVGQPFTFHQCRLESDETFRTSSLKLVRGEALVFNCVMNLPHLSYRASDSVASFLNGAKELRSKLVTLVEEEVGPINDAGFVGLFMDSLHRYSAMYDSLEAGFPMNKWARALVEQVFMGPRIIGSVAQLYMTGEEEGQEKGSWGEWLGAEGFRGVNVSYGNHCQAKLLLGLFNDGYRVEELGNNKLVLGWKSRRLLSASIWACNSESESHF* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1793 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 24 493 IPR005202 -
Psa2g1793 501 PANTHER SCARECROW-LIKE PROTEIN 26 24 493 IPR030028 -
Psa2g1793 501 ProSiteProfiles GRAS family profile. 98 492 IPR005202 -
Psa2g1793 501 Pfam GRAS domain family 107 491 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1793 Psa-Chr2 149628173 149630259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1793 101 495 GRAS Transcription Factor Family AT3G54220 36.090 7.22e-54 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa2g1793 GRAS 6.8e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1793 - - cit:102620887 603.979