Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1780 ATGGCTGCTTCAGTTGACAACCGTCAGTATCGTGGCTTAAACGGCGTCGTTCGCACCTTCAATCCCAGCAACAACTTCATCCACGACCTGAAACCGGGATTCCCGGTAAACTTAGATCCCTTCAGCAGCGACGACGAAGATGACGACGATAACACATTGAACCTCCAAGAACTCATACGAAAAACCAACGCGGAAGTCGAACAGTCAATTCTCGACCCACGAGACGAAGGAACCTTAGACAACTGGGTCACACGAAACGCTTCCATGGTCCGTCTCACAGGGAAACACCCCTTCAATTCAGAACCACCACTCCCTCGTCTCATGCACCACGGTTTCATCACTCCGGTGCCAATCCACTACGTCCGAAACCACGGCGCCGTCCCCAAAGCCCGTTGGGAAGACTGGACGGTCGAAGTTACCGGGTTGGTTAAAAACCCAACCCGGTTCACCATGGACCGTCTCGTCCGCGAGTTTCCCAGCCGGGAGCTTCCCGTTACATTGGTTTGCGCCGGTAACCGTCGCAAGGAACAAAACATGGTGAAACAAAGCGTTGGTTTCAACTGGGGTGCTGCCGCGGTTTCAAACTCAGTATGGCGCGGGGTTTCGTTACGCAACGTGCTGAAACGCTGTGGGATCCAGGCACGGTCCAAAGGTGCGGTTCATGTTTGCTTTTACGGTGCTGAGGATTTACCTGGTGGTGGTGGATCGAAATATGGAACTAGCATTAGGAGAGAAATTGCAATGGATCCTTCTCGTGATGTTATTCTTGCTTACATGCAGAATGGTGAAGCTTTGGCTCCGGATCATGGGTTTCCGGTTCGGGTTATTATACCTGGTTTTATTGGTGGTCGCATGGTGAAATGGCTGAAACGGATTGTTGTTACTTCTGATGAATGTGATGGTCATTATCATTATAAGGATAATAGAGTTCTTCCTTCTCATGTTGATGCAGAACAAGCCAATGAAGAAGGTTGGTGGTACAAGCCGGAATATATCATCAACGAGCTGAACATAAACTCGGTGATTACGACGCCGTGTCACGATGAGATCTTGCCGATAAACTCATGGACCACGCAGACGCCATATACACTGAAAGGTTATTCATATTCCGGGGGTGGAAGAAAAGTGACAAGAGTTGAAATAACAATGGACGGTGGAGAAACATGGCACGTGTGCACATTGGAGCATCCAGAGAAACCTACGAAATACGGCAAGTATTGGTGCTGGTGTTTTTGGTCTTTAGAAGTAGAGGTACTGGACCTTCTAGGGACCAAAGAAATTGCTGTTCGAGCATGGGATGAGGCACTTAATACCCAACCTGAAAACCTCATTTGGAATGTCATGGGTATGATGAACAACTGTTGGTTTAGGGTGAAAACAAACGTGTGTAGGCCCCACAAAGGAGAAATAGGTATTGTGTTTGAACACCCAACACAACCAGGTAACCAATCAGGTGGTTGGATGGCAAAAGAAAGACACTTAGAAAGATCACAAGAAACCAACCTAATTCTCAAAAAAAGTGTCTCTTCACCTTTCATGAACACAACATCAAAAACATACTCCATCTCCGAAGTTAAGAAACACAAAACCCCTGATTCCGCTTGGATCATCGTCCACGGGCACGTCTATGACTGCACCCGCTTCCTTAAAGACCACCCCGGTGGCACGGACAGCATCCTCATCAATGCCGGTACCGATTGTACCGACGAATTCGAAGCCATCCACTCCGACAAAGCCAAGAAATTGCTAGAAGATTATAGAATCGGCGAGCTTGTTACTAATGGTTACACATCAGATTCTTCCTCTCCAAATAACTCAATGCATGGAAACTCCGAATTCACCCATCTTGCACCTATTAAAGAAATCATGGCTCTTAACCCACGTGAGAAAATCCCATGCAAGCTCATTTCAAAAACCTCAATTTCACATGATGTAAGACTCTTCCGTTTCGCATTACCCTCGGATGATCAATTATTGGGATTACCCGTCGGGAAACACGTTTTCTTATGTGTTTCCGTCGACGGAAAATTGACGATGCGAGCTTATACACCAACGAGTAGCATCGATGAAATTGGATATTTTGAATTAGTTGTCAAAATCTACTTCAGAAACGTGCACCCCAAGTTTCCTAATGGTGGACTCATGTCACAATATTTGGACTCACTTACTATTGGGTCAATAGTGGAAGTAAAAGGCCCGGTAGGCCACATTGAGTATCTTGGGAGAGGAAACATTATGGTACATGGGAAACAAAGATTTGCGAAAAAGCTAACATTTTTGGCGGGCGGAACCGGGATCACACCGGTGTATCAAGTGGCGAATGCGATTTTGAAAGACGCCGATGATCGAACTGAAATGCATGTCGTTTACGCGAACCGGACGGAGGATGACATATTGTTGAGGGAAGAGTTGGATGAATGGGCTAAGATATATAGTGATAGGTTTAAGATTTGGTATGTTGTGGAAAATGCAAAAGAAGGGTGGGAATATAGTGTGGGATTCATCACGGAGAGTATCATGAGGGAGCATGTCCCATTGGGTGGTGAGGATACTTTGGCATTGGCTTGTGGGCCACCACCTATGATTCAGTTTGCTGTGCAACCAAATTTGGAAAAGATGGGGTATGATATTAAGAAGGATTTGCTTGTGTTTTAG 2655 0.4614 MAASVDNRQYRGLNGVVRTFNPSNNFIHDLKPGFPVNLDPFSSDDEDDDDNTLNLQELIRKTNAEVEQSILDPRDEGTLDNWVTRNASMVRLTGKHPFNSEPPLPRLMHHGFITPVPIHYVRNHGAVPKARWEDWTVEVTGLVKNPTRFTMDRLVREFPSRELPVTLVCAGNRRKEQNMVKQSVGFNWGAAAVSNSVWRGVSLRNVLKRCGIQARSKGAVHVCFYGAEDLPGGGGSKYGTSIRREIAMDPSRDVILAYMQNGEALAPDHGFPVRVIIPGFIGGRMVKWLKRIVVTSDECDGHYHYKDNRVLPSHVDAEQANEEGWWYKPEYIINELNINSVITTPCHDEILPINSWTTQTPYTLKGYSYSGGGRKVTRVEITMDGGETWHVCTLEHPEKPTKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEALNTQPENLIWNVMGMMNNCWFRVKTNVCRPHKGEIGIVFEHPTQPGNQSGGWMAKERHLERSQETNLILKKSVSSPFMNTTSKTYSISEVKKHKTPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTDEFEAIHSDKAKKLLEDYRIGELVTNGYTSDSSSPNNSMHGNSEFTHLAPIKEIMALNPREKIPCKLISKTSISHDVRLFRFALPSDDQLLGLPVGKHVFLCVSVDGKLTMRAYTPTSSIDEIGYFELVVKIYFRNVHPKFPNGGLMSQYLDSLTIGSIVEVKGPVGHIEYLGRGNIMVHGKQRFAKKLTFLAGGTGITPVYQVANAILKDADDRTEMHVVYANRTEDDILLREELDEWAKIYSDRFKIWYVVENAKEGWEYSVGFITESIMREHVPLGGEDTLALACGPPPMIQFAVQPNLEKMGYDIKKDLLVF* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1780 884 Pfam Mo-co oxidoreductase dimerisation domain 331 462 IPR005066 GO:0016491|GO:0030151
Psa2g1780 884 SMART Cyt_b5_2 520 592 IPR001199 -
Psa2g1780 884 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 727 876 IPR039261 -
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 90 104 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 112 128 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 165 176 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 176 188 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 191 206 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 249 265 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 266 279 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 282 295 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 333 345 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 364 378 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 378 390 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 405 415 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 430 442 IPR008335 GO:0016491
Psa2g1780 884 PRINTS Eukaryotic molybdopterin domain signature 443 456 IPR008335 GO:0016491
Psa2g1780 884 Gene3D Translation factors 620 734 - -
Psa2g1780 884 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 548 555 IPR018506 GO:0020037
Psa2g1780 884 PRINTS Cytochrome B5 reductase signature 659 670 - -
Psa2g1780 884 PRINTS Cytochrome B5 reductase signature 680 687 - -
Psa2g1780 884 PRINTS Cytochrome B5 reductase signature 725 739 - -
Psa2g1780 884 PRINTS Cytochrome B5 reductase signature 758 777 - -
Psa2g1780 884 PRINTS Cytochrome B5 reductase signature 796 807 - -
Psa2g1780 884 PRINTS Cytochrome B5 reductase signature 852 860 - -
Psa2g1780 884 Pfam Oxidoreductase FAD-binding domain 633 739 IPR008333 -
Psa2g1780 884 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 551 561 IPR001709 GO:0016491
Psa2g1780 884 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 680 687 IPR001709 GO:0016491
Psa2g1780 884 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 712 721 IPR001709 GO:0016491
Psa2g1780 884 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 758 777 IPR001709 GO:0016491
Psa2g1780 884 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 784 793 IPR001709 GO:0016491
Psa2g1780 884 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 796 807 IPR001709 GO:0016491
Psa2g1780 884 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 828 844 IPR001709 GO:0016491
Psa2g1780 884 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 852 860 IPR001709 GO:0016491
Psa2g1780 884 PANTHER NADH-CYTOCHROME B5 REDUCTASE 50 884 IPR001834 GO:0016491
Psa2g1780 884 Pfam Cytochrome b5-like Heme/Steroid binding domain 523 591 IPR001199 -
Psa2g1780 884 Pfam Oxidoreductase NAD-binding domain 759 866 IPR001433 GO:0016491
Psa2g1780 884 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 517 592 IPR001199 -
Psa2g1780 884 Gene3D - 512 595 IPR036400 -
Psa2g1780 884 Gene3D - 335 510 - -
Psa2g1780 884 PIRSF Nitr_rd_NADH 18 883 IPR012137 GO:0006809|GO:0042128|GO:0050464
Psa2g1780 884 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 72 333 IPR036374 -
Psa2g1780 884 SUPERFAMILY Riboflavin synthase domain-like 622 740 IPR017938 -
Psa2g1780 884 PRINTS Cytochrome B5 signature 542 552 IPR001199 -
Psa2g1780 884 PRINTS Cytochrome B5 signature 552 566 IPR001199 -
Psa2g1780 884 PRINTS Cytochrome B5 signature 567 574 IPR001199 -
Psa2g1780 884 PRINTS Cytochrome B5 signature 579 591 IPR001199 -
Psa2g1780 884 Pfam Oxidoreductase molybdopterin binding domain 124 303 IPR000572 -
Psa2g1780 884 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 515 596 IPR036400 -
Psa2g1780 884 Gene3D - 735 884 IPR039261 -
Psa2g1780 884 CDD cyt_b5_reduct_like 633 884 - -
Psa2g1780 884 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 141 176 IPR022407 GO:0043546
Psa2g1780 884 CDD eukary_NR_Moco 75 460 - -
Psa2g1780 884 PANTHER NITRATE REDUCTASE 50 884 - -
Psa2g1780 884 SUPERFAMILY E set domains 335 462 IPR014756 -
Psa2g1780 884 Gene3D - 94 334 IPR036374 -
Psa2g1780 884 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 628 740 IPR017927 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1780 Psa-Chr2 146026534 146031720 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1780 620 875 NADPH P450 reductases AT5G17770 39.147 3.50e-51 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1780 K10534 - gmx:100813471 1497.64