Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1775 ATGAATCACTTATCTCGAATTTTCGCTTATAGAAAGCAACCAACGGATATGAACTCGAAGAAGAAGACTCCAAGGAAACAACAACCCAAGTTAGAACGCCGTAATGCGGCGAAGAACTTCAATTACGATGCTCAACCATCGTCGCCGGATTCCTCTCCGTCGTCGTCAATTCTCTACACTCGATCGATGGATTTTTACGATCGAACCAGCTTTAGAGTTGAAGGAGTCGAGGGCGAGTTCGATATTATTTGTCGGAGCCTCGGGCTTAGCGGACCGGAGGATTTCTCGATTCCGGCGGCGGCTTGGGAAGCGATGAAGGTTCGATCTTCGTCTGATGTGTTACCGAGGTTGAATATTTCGGAATTCGATGAAAGGAAGGTGGATGATGAAATTGTAGTAGCAGAGTGTGATGATAGGGTTTCACTTTCAGTTAGAGATTCTCCCGCTGAGACTAGAGATTCTCCCGCTGAGACTAGCGGTTGCTGCAACATAGGTGATGGTGGTGGAAAGGATAGGGTTCAGATTAGGGGTTTTGATGAGGCTAGCAATTGCTATACCGGCGGCGAAAATAGGGTTCCGATTAGGGATGTTGATGAGACGAGTACTTGTTTAAATACTGGCGGTGGAGGTATTAAAGGATTTAGACCTCCGATGCTTAAGCCGCCACCAGGAGTTAGGGTTTCTGTTTTGGACAGCACGTGTTCCACGTGGGATCTTCTGAGGGATTTTGCTCCTGAAGGGGAAGGAAAAGGAAAAGAAAAAGAAGAAGAGGAAGGGGAAGGGAAGAACGATGGAGAAGAAGGGGAAGGGGAAGTGGGTGATGTGATATTGAAGAGAGATGAGGAGGAAAATGTTGAGATTATTGGTGACAAAAGCTCCAGCACAAGGAACACTACAACGGAGCCTAGGTCCAATAGTATATCTCCTAATGTGAGATTGAAACCTGTTATCACTCCTGGTAGCTGGCAAAAGGGTGAGCTTTTGGGGCGCGGTTCATTTGGATCTGTATATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTAAAACAAGTATCACTGCTTGATCAAGGGAGTCATGGAAAACAAAGTGTCGTTCAACTGGAGCACGAAATTGCACTTTTGAGTCAGTTTGAACATGAGAATATAGTTCGATACTTTGGCACTGAAATGGATCAATCAAATCTATATATCTTTATCGAGTTTGTAACCAAAGGTTCCCTTTTAAGCCTCTACCGGAGGTATAAACTTCGAGATTCCCAAGTATCTGCTTATACAAGACAAATTCTCAACGGTTTAAAGTATCTTCATGATCGCAATATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTTGACGCAAATGGGTCTGTCAAGGTTGCGGATTTTGGATTGGCAAAGGCAATTAAATTGAATGATGTTAAATCATGCCAGGGAACAGCATTCTGGATGGCACCAGAGGTTGTAAAAGGAAAAGTGAAAGGTTATGGACTTCCTGCTGATATATGGAGTCTAGGATGCACTGTGTTGGAGATGTTAACTGGGCAAATTCCCTACTATCCTATGGAATGTATCACCGCAATGTTTAGAATCGGAAAAGGGGAACTACCTCCGGTACCTGATTCTCTTTCAAGAGATGCACGTGATTTCATCCTGCAGTGTCTTAAAGTTAATCCAGATGACCGTCCCACTGCGGCTCAACTCTTAGACCACAAATTTCTCCAGAGGTCATTCTCCCAGTCCTCTGGCTCTGCTTCTCCATATACCATGAGAAGAGGTTAA 1785 0.4398 MNHLSRIFAYRKQPTDMNSKKKTPRKQQPKLERRNAAKNFNYDAQPSSPDSSPSSSILYTRSMDFYDRTSFRVEGVEGEFDIICRSLGLSGPEDFSIPAAAWEAMKVRSSSDVLPRLNISEFDERKVDDEIVVAECDDRVSLSVRDSPAETRDSPAETSGCCNIGDGGGKDRVQIRGFDEASNCYTGGENRVPIRDVDETSTCLNTGGGGIKGFRPPMLKPPPGVRVSVLDSTCSTWDLLRDFAPEGEGKGKEKEEEEGEGKNDGEEGEGEVGDVILKRDEEENVEIIGDKSSSTRNTTTEPRSNSISPNVRLKPVITPGSWQKGELLGRGSFGSVYEGISEDGFFFAVKQVSLLDQGSHGKQSVVQLEHEIALLSQFEHENIVRYFGTEMDQSNLYIFIEFVTKGSLLSLYRRYKLRDSQVSAYTRQILNGLKYLHDRNIVHRDIKCANILVDANGSVKVADFGLAKAIKLNDVKSCQGTAFWMAPEVVKGKVKGYGLPADIWSLGCTVLEMLTGQIPYYPMECITAMFRIGKGELPPVPDSLSRDARDFILQCLKVNPDDRPTAAQLLDHKFLQRSFSQSSGSASPYTMRRG* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1775 594 Gene3D Transferase(Phosphotransferase) domain 1 320 591 - -
Psa2g1775 594 SMART serkin_6 322 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1775 594 MobiDBLite consensus disorder prediction 242 308 - -
Psa2g1775 594 SUPERFAMILY Protein kinase-like (PK-like) 303 579 IPR011009 -
Psa2g1775 594 MobiDBLite consensus disorder prediction 1 55 - -
Psa2g1775 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Psa2g1775 594 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 66 588 - -
Psa2g1775 594 MobiDBLite consensus disorder prediction 290 308 - -
Psa2g1775 594 ProSiteProfiles Protein kinase domain profile. 322 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1775 594 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 66 588 - -
Psa2g1775 594 PRINTS Tyrosine kinase catalytic domain signature 400 413 IPR001245 GO:0004672|GO:0006468
Psa2g1775 594 PRINTS Tyrosine kinase catalytic domain signature 435 453 IPR001245 GO:0004672|GO:0006468
Psa2g1775 594 PRINTS Tyrosine kinase catalytic domain signature 501 523 IPR001245 GO:0004672|GO:0006468
Psa2g1775 594 PRINTS Tyrosine kinase catalytic domain signature 544 566 IPR001245 GO:0004672|GO:0006468
Psa2g1775 594 MobiDBLite consensus disorder prediction 243 259 - -
Psa2g1775 594 MobiDBLite consensus disorder prediction 40 55 - -
Psa2g1775 594 MobiDBLite consensus disorder prediction 266 289 - -
Psa2g1775 594 Pfam Protein kinase domain 323 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1775 594 MobiDBLite consensus disorder prediction 15 37 - -
Psa2g1775 594 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1775 Psa-Chr2 145759139 145767585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1775 4 577 MAP Kinase Kinase Kinase AT4G08500 49.755 2.62e-169 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa2g1775 Pkinase 2.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1775 K13414 - gmx:100804388 696.427