Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1774 ATGAACTCTTCATCATCAACAACTGAACTAGTTGCGGCGAAAAGGATGGATATATATGAGTCATTTCATCAAGTGAACTTGTGGGAAGATAGCTTTAAAGTTGATCATAGCACTTTGAATCCAATTTCTTCACCAATGTTGATGATGAACAGTAGTAGCATAGAGAACAAGTCCGAATGTGTTCTTCATGAATCAAGAGAACCTTCCGAAGATGATCAAGAGATTATTGAAGAACCTATTCCTAAGGTGTTAAGACGACAAGCACAAAATCGTGAGGCTGCTCGAAAATGTCGACTGCGAAAGAAGGCTTATGTTCAACAATTGGAAACAAGTAGATTGAAGCTCATGCAATTGGAACTTGAGATTGAGAAAACAAGAAAACATGGTTTGAACCGAAGCAATTCATTAGATGTCGGTTATATCGGATCATCCCGAACAATAAATTCAGAAATATCTTTGTTTGAAATCGAATATGGACGATGGATTGAAGAACAAGATAGGCAAAATCAAGAACTAAAAAATGCATTGCAAAATAATGCATCTGATATACAACTTCATCTACTTGTTGAAAGTAGTTTGAACCAATACTCAAATCTTTTCAGAATGAAAGCAGAAGCTGCCAAGGTTGATGTGTTCTATTTAATCTCCGGCGCATGGAAATCATCGGTAGAACGTCTTTTTCTTTGGATCGGAGGATCTCGACCGTCGCAGATTCTAAATATCGTCGTACCAAAGCTCGATGCTTTAACCGATGAACAAATGGGTAGCATTAACAATCTCCGGTTATCTTCTCAACAAGCTGAGGATGCTCTTTCAATGGGGTTAGAGAAACTTCAGCAGAGTATGGTTTACAATATTCAAGCTGATCCATTGGATTTCGGAAACTACGGTCTTCAAATGGCTTATGCCATGGATAAAGGAGAAGCATTAGAAGATTTTGTAAACCAGATCATCTAA 957 0.3772 MNSSSSTTELVAAKRMDIYESFHQVNLWEDSFKVDHSTLNPISSPMLMMNSSSIENKSECVLHESREPSEDDQEIIEEPIPKVLRRQAQNREAARKCRLRKKAYVQQLETSRLKLMQLELEIEKTRKHGLNRSNSLDVGYIGSSRTINSEISLFEIEYGRWIEEQDRQNQELKNALQNNASDIQLHLLVESSLNQYSNLFRMKAEAAKVDVFYLISGAWKSSVERLFLWIGGSRPSQILNIVVPKLDALTDEQMGSINNLRLSSQQAEDALSMGLEKLQQSMVYNIQADPLDFGNYGLQMAYAMDKGEALEDFVNQII* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1774 318 Pfam bZIP transcription factor 82 111 IPR004827 GO:0003700|GO:0006355
Psa2g1774 318 ProSiteProfiles DOG1 domain profile. 151 318 IPR025422 GO:0006351|GO:0043565
Psa2g1774 318 Coils Coil 101 128 - -
Psa2g1774 318 PANTHER FACTOR TGA7, PUTATIVE-RELATED 16 316 - -
Psa2g1774 318 Coils Coil 162 182 - -
Psa2g1774 318 PANTHER TRANSCRIPTION FACTOR TGA9 16 316 - -
Psa2g1774 318 SMART brlzneu 77 142 IPR004827 GO:0003700|GO:0006355
Psa2g1774 318 SUPERFAMILY Leucine zipper domain 84 114 IPR046347 GO:0003700|GO:0006355
Psa2g1774 318 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Psa2g1774 318 Gene3D - 82 136 - -
Psa2g1774 318 Pfam Seed dormancy control 169 243 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1774 Psa-Chr2 145608540 145611737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1774 1 316 Calmodulin-binding Proteins AT5G10030 48.113 3.44e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa2g1774 DOG1 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1774 K14431 - gmx:100775882 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1774 2 145608540 145611737 Psa5g3162 5 246670970 246673284 PCT