Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1766 ATGAATTCTAAGGGGATTCTTTTGGACATTCCATTTGCTTGTTTTTTGTTGGATGATGGATCATCATCATGCTGTTGTTGGGCTAATGCTGAGAGGGCGGCTACCTTGTTGAGACTACAAGAAGAACCCACCACATCATATCATCTTGGCAGAATTTTGAAGAAGCAATCAAAAGTCACTGAGAATGGCTTGCAGACTGCTTCAAGGGAAGACAAAATCCAACTTATGCCACTGGACTCCTCTTGGCACGTCGGGTTCTCAAGACACTTGAGATGGATGAAGAGTATGAGGGAAATGTTGAGGCTACTGGAGAGGACTATTCTGTGGAGCCAGCTGATTCCAGGAGGCCATTCCGTGCTCTCCTTGATGTTGGTCTTTGTTAAGACCACAACTGGAAACCGTGTCTTTGGTGCTCTGAAGGGTGCACTGGATGGTGGTTTGGATATCCCTCATAGTGACAAAAGGTTTGCTGATTTTGATAAGGAAAAGCAGGAGCTTGATGCTGAGGTTCACCGCAAATATATCTTTGGTGGACATGTTTCTACCTATATGAAGACTTTGATTGAAGACGAACCAGAGAAATATCAGACTCATTTCAATAAGTATATTAAGAAGGGAATCGAAGCTAATGGACTTGAGGAGCTTTACAAGAAG 654 0.4327 MNSKGILLDIPFACFLLDDGSSSCCCWANAERAATLLRLQEEPTTSYHLGRILKKQSKVTENGLQTASREDKIQLMPLDSSWHVGFSRHLRWMKSMREMLRLLERTILWSQLIPGGHSVLSLMLVFVKTTTGNRVFGALKGALDGGLDIPHSDKRFADFDKEKQELDAEVHRKYIFGGHVSTYMKTLIEDEPEKYQTHFNKYIKKGIEANGLEELYKK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1766 218 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 126 152 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Psa2g1766 218 PANTHER - 124 218 - -
Psa2g1766 218 PANTHER RIBOSOMAL PROTEIN L5-RELATED 124 218 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Psa2g1766 218 Gene3D - 117 218 - -
Psa2g1766 218 SUPERFAMILY Translational machinery components 127 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1766 Psa-Chr2 144927897 144929004 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1766 126 218 Cytoplasmic Ribosomal Protein Gene Family AT3G25520 77.419 4.54e-48 158