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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Psa2g1738
ATGGGTCGTGTTAAACTTGAGATAAAAAGAATAGAGAATACAACGAATCGACAAGTTACATTTTCAAAACGTAGAAATGGTCTCATTAAGAAAGCTTATGAGTTATCTATCCTATGTGATATTGATATTGCACTTGTAATGTTTTCTCCATCAAATCGTCTTAGTCATTTTTCCGGTAAAAGAAGGATAGAGGATGTTTTAACTCGTTATATTAATCTTCCTGATCAAGAAAGAGATAATGCTGTAAGTTTTCCTGAGGTGCCATACAGAAGGGGAATTCAGAACAAGGAGTATTTGCTCAGGACACTTCAACAGTTGAGGAGTGAAAATGACATAGCTCTTCATATGTCCAATCCGGGAGACATTAACTCTGAGATTGAGGAACTCCAACAAGAAGTCAGTAGATTACAACAACAACTTCAAATAGCAGAGGAGCAGATAAGAATATATGAACCCGACCCATTAAAGATGACATCTATGACTGAGCTTGAAACAAGTGAAAAAAATATAGTTGAAACATTGGCACGTGTCATGCAGAGAAAGGAACTTTTGTTGAACAACCATTTATCTTCGTATGATCCATCTGGTATTCAGGGGATGTCAAGCACTTTCGAAAATGTAGGTTGGCTACAGGATGGTAGTCAGAACCATCAAAATATTTTTGATGCATCAGCTCCTATGGATCCTCTCAGGGATTTGTCCTCTACAGTATACGGTTCATTTTCACAAGGAACCAGTTCAAACGTTGATCCAAGAGGCATAGGTGAATGCCACGTGGCAAATACAAACGACTCAAATCTTCAAACATGGCCACAAGGATACACATTATATCCACATCATCAACAACATCAACATCAACAACATCATCATATGCAACATGACATGGTTGGAACTGATCATCATCAACATCATCATCACCATAATATTCAAGATATGATGCCACATGGACAAATGAATATGCCTATCACTGCCTCACAAGTTGAACCACCCAAAAATGAATCATCAGATCAATATGATCAATGTAAACAACCTAATCATCAGCTTAATTCATGCTCAATGACACATACTAATTAA
1074
0.3706
MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALVMFSPSNRLSHFSGKRRIEDVLTRYINLPDQERDNAVSFPEVPYRRGIQNKEYLLRTLQQLRSENDIALHMSNPGDINSEIEELQQEVSRLQQQLQIAEEQIRIYEPDPLKMTSMTELETSEKNIVETLARVMQRKELLLNNHLSSYDPSGIQGMSSTFENVGWLQDGSQNHQNIFDASAPMDPLRDLSSTVYGSFSQGTSSNVDPRGIGECHVANTNDSNLQTWPQGYTLYPHHQQHQHQQHHHMQHDMVGTDHHQHHHHHNIQDMMPHGQMNMPITASQVEPPKNESSDQYDQCKQPNHQLNSCSMTHTN*
358
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Psa2g1738
357
Gene3D
-
13
86
IPR036879
GO:0003677|GO:0046983
Psa2g1738
357
Coils
Coil
353
357
-
-
Psa2g1738
357
PANTHER
SERUM RESPONSE FACTOR HOMOLOG
1
275
-
-
Psa2g1738
357
Coils
Coil
126
146
-
-
Psa2g1738
357
ProSiteProfiles
MADS-box domain profile.
1
61
IPR002100
GO:0003677|GO:0046983
Psa2g1738
357
PRINTS
MADS domain signature
3
23
IPR002100
GO:0003677|GO:0046983
Psa2g1738
357
PRINTS
MADS domain signature
23
38
IPR002100
GO:0003677|GO:0046983
Psa2g1738
357
PRINTS
MADS domain signature
38
59
IPR002100
GO:0003677|GO:0046983
Psa2g1738
357
CDD
MADS_MEF2_like
2
75
IPR033896
GO:0000977|GO:0045944
Psa2g1738
357
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
10
57
IPR002100
GO:0003677|GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Psa2g1738
Psa-Chr2
142983233
142997477
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Psa2g1738
1
324
Type I MADS-box Gene Family
AT1G22130
55.422
1.60e-115
337
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-MIKC
Psa2g1738
SRF-TF
3e-25
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Psa2g1738
-
-
gmx:100305913
521.546
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