Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1703 ATGACGAACCAAAATGCGTTGGGGAAGCAACGTGTGAACGAGAGGCTTATGGAGATAGCAATGTCGATTTCCGACTCTAACGATTTACCAGCAACAATAGTACCTGAATTAATGGCTTTGTTTGGTGAGTTTTTAACTCAGCAGAAAAACAATCTCATAAAACCTCTAGAAGATGAAAATGGCAAAGCAACAACCAAGACTAACAAATGGATTGATTCCATGAGAGCTTCTTCTCCTACCAGAACACGAAACACTTCCGAAAATCGCGAACAAATTAACTGGAAGCTTTTTCATCCTTCAGCCTTGAACATGTTTGATCAAATAATGTACAAAGCAAACGGAAAACAAATAGTTGTTTTTCTTGATTATGATGGAACTCTCTCCCCAATTGTTGCAGATCCAAATAAAGCTTATATGACTAAAAAGATGAGAATGACATTGAAGGATATAGCAAGACATTTTCCTACTGCCATCGTTAGTGGAAGGTGCTTAGACAAGCTATTTAGCTTTGTAAGATTGACAGAATTATACTATGCTGGAAGTCATGGGATGGATATAAAAGGACCAACAAATAAGAAAAGCACTAAGAAAGGTGGTAATGATGAGGTACTTTTGCAGCCTGCAAGTGAATTCTTGCCCATGATCAATGAGGTTTATAAAATCTTGGTGGAAAAAACAAAGGATGTTCCTGGAGCTATGGTGGAAAATAACAAATTTTGTTTGTCTGTACATTTTCGCTGTGTTGATGAGAAGAGTTGGACAACATTGGCTGAACAAGTAAGTTTGGTGCTCAATGATTTCCCAAAACTAAAACTAACTCAAGGAAGAAAAGTGTTGGAAATTAGACCAACCATAAAATGGGACAAAGGAAGAGCTCTAGAATTTTTGTTAGAGTCACTTGGATTTGCAAATTCTAACAAAGTATATCCAATCTATATTGGTGATGACCGAACTGACGAAGATGCTTTTAAGGTTTTAAGCAATAGAGGACAAGGGAGTGGGATTCTTGTATCTAAAATTCCAAAAGAAACCAATGCTTCTTACACATTGCAAGATCCATCTGAGGTTGGAGAATTTTTGCAGCATTTGGTTGAATGGAAAAGAACAAACTCTGATAGCCACAAGTTGTAG 1131 0.3705 MTNQNALGKQRVNERLMEIAMSISDSNDLPATIVPELMALFGEFLTQQKNNLIKPLEDENGKATTKTNKWIDSMRASSPTRTRNTSENREQINWKLFHPSALNMFDQIMYKANGKQIVVFLDYDGTLSPIVADPNKAYMTKKMRMTLKDIARHFPTAIVSGRCLDKLFSFVRLTELYYAGSHGMDIKGPTNKKSTKKGGNDEVLLQPASEFLPMINEVYKILVEKTKDVPGAMVENNKFCLSVHFRCVDEKSWTTLAEQVSLVLNDFPKLKLTQGRKVLEIRPTIKWDKGRALEFLLESLGFANSNKVYPIYIGDDRTDEDAFKVLSNRGQGSGILVSKIPKETNASYTLQDPSEVGEFLQHLVEWKRTNSDSHKL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1703 376 SUPERFAMILY HAD-like 118 367 IPR036412 -
Psa2g1703 376 Gene3D - 119 350 IPR023214 -
Psa2g1703 376 Gene3D - 200 284 - -
Psa2g1703 376 TIGRFAM T6PP: trehalose-phosphatase 115 364 IPR003337 GO:0003824|GO:0005992
Psa2g1703 376 MobiDBLite consensus disorder prediction 63 88 - -
Psa2g1703 376 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 3 376 - -
Psa2g1703 376 MobiDBLite consensus disorder prediction 66 88 - -
Psa2g1703 376 CDD HAD_TPP 118 358 - -
Psa2g1703 376 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 119 327 IPR006379 -
Psa2g1703 376 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 3 376 IPR044651 GO:0004805|GO:0005992
Psa2g1703 376 Pfam Trehalose-phosphatase 120 354 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1703 Psa-Chr2 140001531 140004143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1703 113 360 Trehalose Biosynthesis Gene Families AT1G23870 24.806 3.89e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1703 K01087 - gmx:100792915 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1703 2 140001531 140004143 Psa5g3206 5 249682581 249684229 PCT