Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1702 ATGCAAATTTGTTTCAGAGCATTTTGTCCGTACCAAGTTGCTTCCAAGGACATTCTGGTTGACATGCACACAGACCATCATGATATTGGTATATTTTCTGTTCGCATTTGCGGTAAACGGAAACCTTTATCCTGCGGTTTGCATTTCTTGGTATCTGCTATGGCAATGGCAACTAACTTCAAAGTGGCTGCTAATCCTTTTGTAACACAAGTCAACAATGGCTTGCATGAGATTACCAAAGATCCTACAAAGAACTATCAAGGTTCTGGCGTTGGTATTACCGGAATACTCTGCCGCAATTTCTGCAATAAAGAAGGCGTCAACAAGTGTTCTTCATTGGATTGTTTAGCAATACTCAATGCTCGTACTTCCATTCTTGCTGCTGCCAACCCCGCTGGAGGACGGTATGATAAGTCTAAGCCGCTGAAGTACAAAGTGGCTCTCCCTCCTGCTAAAGCTGGACAAGAAAAGAGCAGATATGGTTTTGTGCATTTTGCTGATAGATCATGTGCAATGAAGGCATTGAAGAACACAGAGAATATGGTTGGAGGTGGATATGGTGCTGTTGGTGCAGGATATGGTGCCACTGGCTTTGCACAGCCACTAATGTATGGTCCGGGAGCAACCCCTGCTGGCATGGCAATGATGCCAATGTTTTTTTTACCAGATGGAAGGATTGCATATGTATTGCAACAACCAAGGTTTACCGCAGTCACGCTTGCAACAGCCAGGTTTTCAACAGCATGCTCCTTCACCAGTTTGACTGGTTAA 771 0.4423 MQICFRAFCPYQVASKDILVDMHTDHHDIGIFSVRICGKRKPLSCGLHFLVSAMAMATNFKVAANPFVTQVNNGLHEITKDPTKNYQGSGVGITGILCRNFCNKEGVNKCSSLDCLAILNARTSILAAANPAGGRYDKSKPLKYKVALPPAKAGQEKSRYGFVHFADRSCAMKALKNTENMVGGGYGAVGAGYGATGFAQPLMYGPGATPAGMAMMPMFFLPDGRIAYVLQQPRFTAVTLATARFSTACSFTSLTG* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1702 256 Pfam MCM P-loop domain 116 150 IPR001208 GO:0003677|GO:0005524|GO:0032508
Psa2g1702 256 Gene3D - 105 153 IPR027417 -
Psa2g1702 256 PANTHER RNA RECOGNITION MOTIF 181 239 - -
Psa2g1702 256 PANTHER RNA RECOGNITION MOTIF 145 180 - -
Psa2g1702 256 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 145 180 - -
Psa2g1702 256 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 181 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1702 Psa-Chr2 139776250 139777776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1702 117 151 Core DNA Replication Machinery Family AT5G44635 88.571 1.40e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1702 K13161 - cpap:110822724 107.842