Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1692 ATGGTTATGGCCACTGTCGCAACGAGAGGAATTGGAGTCACAAAGCTCCATGACCCCTACAATCCCAACCTTAAATCTCTCTTTCTTGGCCAAACACTTAGAATCAAACCCTCAATTAATAATCAACAACCACCCTGCAGTGTCAAACTCTCAACCCCAAAAGCGTTTCATGGGGGTGAATGGCTTCACTCAGTTCACAGCCTTTTTGTTGGTGTTGGGGTTGGACTTCCGTGCACTGTCATGGAGTGCGGGGACATGATTTACAGAAGCACTCTTCCTAAGCCTAGTGGGTTAACACTTACTATCCCAGGTGTTGTTCTTGCTTTTGGTGCTCTCTCTTATCTTTGGGCTACACCTGGTGTTGCTCCTGGTTTCTTTGATATGTTTGTTCTTGCTTTTGTTGAAAGGTTGTTTAGACCCACTTTCAGAAAGGATGATTTTGTTCTAGGGAAAAAGCTGGGAGAGGGATCATTTGGAGTTGTTTATAGAGTCACACTAGCTAACAAGCCCTCTTCAAAGGAAGGTGACTTAGTCTTGAAGAAAGCCACTGAATATGGCGCTGTAGAAATTTGGATGAATGAGCGAGTACGAAGAGCTTGTGCAAACAGCTGTGCAGATTTTGTTTATGGGTTTCTTGAGAGGTCTACAAAGAAGACTCCTGAATATTGGCTTATATGGCAGTTTGAAGGGGATGCCACCTTAGCTGATCTATTGCAGAGTAGAGATTTTCCTTACAATGTTGAAACATTGATTATTGGTGAGGTACAAGATTTGCCGAAGAGATTGGAGAGAGAAAACAGAATTATTCAAACAATCATAAGACAACTCTTGTTTGCATTAGACGGTCTTCACTCAACTGGTATTGTGCATAGGGATATTAAGCCACAGAACATTATTTTCTCTGAAGGGTCTCGTACATTCAAAATAATTGATCTTGGAGCTGCTACAGATTTGCGAGTTGGCATCAACTATATTCCTAAGGAGTTTCTTTTGGATCCAAGATATGCTGCACCAGAGCAGTACATTATGAGCACACAAACTCCATCTGCACCCTCAGCTCCGGTTGCTACTGCACTCTCTCCAGTCTTATGGCAGTTGAATCTTCCTGACAGATTTGATATATACAGTACTGGTCTAATATTTCTCCAAATGGCATTTCCCGGTTTGCGCACTGATAATAGTCTCATACAATTCAACCGCCAATTGAAGAGGTGTGACTATGACTTGGTTGCATGGAGAAAAACTGTCGAGCCTCGATGTGGTAGTGAACTTAGGAGGGGCTTTGAGCTGTTGGATTTAGATGGTGGAATAGGATGGGAACTTTTGACATCAATGGTTCGATACAAAGCAAGACAAAGGCTGAGTGCAAAAGCAGCGTTAGCTCATCCTTACTTTGACAAAGAAGGTTTGTTGGCTTTATCTTTTATGCAAAATTTGAGGCTACGGTTCTTTAGAGCTACCCAGCAGGATTATGGAGAAGCTGCCAAGTGGATTATTCAACTTATGGCAAGATCAGGAACACAAAAGGATGGCGGATTCACTGAAGCTCAGCTCCAGGAACTTAGAGAAATTGTGCCCAAGAAAAAAACTGGTGCAAAGAGAAATGCTCTAGCTTCAGCTCTTAAAGTACAGAGGAAAATTATAAAAACCTTAAATGAGAGTATGGATGAGCTCAGCAGAAACAGGAAAAGCATTTGGTGGAGGAGATGGATCCCAAGAGAGGAATGA 1728 0.423 MVMATVATRGIGVTKLHDPYNPNLKSLFLGQTLRIKPSINNQQPPCSVKLSTPKAFHGGEWLHSVHSLFVGVGVGLPCTVMECGDMIYRSTLPKPSGLTLTIPGVVLAFGALSYLWATPGVAPGFFDMFVLAFVERLFRPTFRKDDFVLGKKLGEGSFGVVYRVTLANKPSSKEGDLVLKKATEYGAVEIWMNERVRRACANSCADFVYGFLERSTKKTPEYWLIWQFEGDATLADLLQSRDFPYNVETLIIGEVQDLPKRLERENRIIQTIIRQLLFALDGLHSTGIVHRDIKPQNIIFSEGSRTFKIIDLGAATDLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSTGLIFLQMAFPGLRTDNSLIQFNRQLKRCDYDLVAWRKTVEPRCGSELRRGFELLDLDGGIGWELLTSMVRYKARQRLSAKAALAHPYFDKEGLLALSFMQNLRLRFFRATQQDYGEAAKWIIQLMARSGTQKDGGFTEAQLQELREIVPKKKTGAKRNALASALKVQRKIIKTLNESMDELSRNRKSIWWRRWIPREE* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1692 575 SMART serkin_6 147 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1692 575 Gene3D Phosphorylase Kinase; domain 1 134 228 - -
Psa2g1692 575 Gene3D Transferase(Phosphotransferase) domain 1 255 470 - -
Psa2g1692 575 SUPERFAMILY Protein kinase-like (PK-like) 132 467 IPR011009 -
Psa2g1692 575 CDD STKc_SNT7_plant 151 465 - -
Psa2g1692 575 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 18 575 IPR044803 GO:0004674|GO:0009579
Psa2g1692 575 Pfam Protein kinase domain 148 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1692 575 ProSitePatterns Protein kinases ATP-binding region signature. 153 180 IPR017441 GO:0005524
Psa2g1692 575 Coils Coil 541 561 - -
Psa2g1692 575 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 18 575 - -
Psa2g1692 575 ProSiteProfiles Protein kinase domain profile. 147 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1692 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1692 Psa-Chr2 137171369 137175336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1692 265 466 Core Cell Cycle Gene Families AT2G38620 30.986 3.14e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Psa2g1692 Pkinase 1.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1692 - - gmx:100778588 954.125