Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g1674 | ATGAATTACATAACTCTAGTATTCACTAAACTAAAATTGGTACTCGAGTTCCTAATATATTATCCTTTCTATAAGCTTCACGATTCTCATTTTCCTCCAATAATTGCAGAAATGTACAATATATGCAATTATGAAGTCACCCCTAACTCAGAGGAAGATGTAGATTGTGCTGTGTGTCTTTGCAAAATAGAAGAAGGGGATGAGATTAGAGTATTGAGGTGTGAACATAAGTATCACAGAAACTGTTTGGATAAATGGGTTAGTTTCAAGAACCATACTTGTCCTCTTTGTAGGGAAACATTGAGACCAAGAAAGGCCATCGCTGAGCTTGGAGCTGAAGTTCTTAAATTTAATTTTTGTGTAATCCGGAATGACCGAGATCGTGATGATCGGTGGATACGATGA | 405 | 0.3654 | MNYITLVFTKLKLVLEFLIYYPFYKLHDSHFPPIIAEMYNICNYEVTPNSEEDVDCAVCLCKIEEGDEIRVLRCEHKYHRNCLDKWVSFKNHTCPLCRETLRPRKAIAELGAEVLKFNFCVIRNDRDRDDRWIR* | 135 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g1674 | 134 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 35 | 105 | IPR013083 | - | |
Psa2g1674 | 134 | Pfam | Ring finger domain | 55 | 98 | IPR001841 | - | |
Psa2g1674 | 134 | ProSiteProfiles | Zinc finger RING-type profile. | 56 | 98 | IPR001841 | - | |
Psa2g1674 | 134 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 2 | 126 | - | - | |
Psa2g1674 | 134 | SMART | ring_2 | 56 | 97 | IPR001841 | - | |
Psa2g1674 | 134 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED | 2 | 126 | - | - | |
Psa2g1674 | 134 | SUPERFAMILY | RING/U-box | 50 | 104 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g1674 | Psa-Chr2 | 135459864 | 135460891 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g1674 | 55 | 101 | C3H Transcription Factor Family | AT1G15100 | 53.191 | 1.38e-13 | 62.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g1674 | K16282 | - | mtr:MTR_3g463010 | 140.198 |