Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1674 ATGAATTACATAACTCTAGTATTCACTAAACTAAAATTGGTACTCGAGTTCCTAATATATTATCCTTTCTATAAGCTTCACGATTCTCATTTTCCTCCAATAATTGCAGAAATGTACAATATATGCAATTATGAAGTCACCCCTAACTCAGAGGAAGATGTAGATTGTGCTGTGTGTCTTTGCAAAATAGAAGAAGGGGATGAGATTAGAGTATTGAGGTGTGAACATAAGTATCACAGAAACTGTTTGGATAAATGGGTTAGTTTCAAGAACCATACTTGTCCTCTTTGTAGGGAAACATTGAGACCAAGAAAGGCCATCGCTGAGCTTGGAGCTGAAGTTCTTAAATTTAATTTTTGTGTAATCCGGAATGACCGAGATCGTGATGATCGGTGGATACGATGA 405 0.3654 MNYITLVFTKLKLVLEFLIYYPFYKLHDSHFPPIIAEMYNICNYEVTPNSEEDVDCAVCLCKIEEGDEIRVLRCEHKYHRNCLDKWVSFKNHTCPLCRETLRPRKAIAELGAEVLKFNFCVIRNDRDRDDRWIR* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1674 134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 105 IPR013083 -
Psa2g1674 134 Pfam Ring finger domain 55 98 IPR001841 -
Psa2g1674 134 ProSiteProfiles Zinc finger RING-type profile. 56 98 IPR001841 -
Psa2g1674 134 PANTHER RING ZINC FINGER PROTEIN-RELATED 2 126 - -
Psa2g1674 134 SMART ring_2 56 97 IPR001841 -
Psa2g1674 134 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 2 126 - -
Psa2g1674 134 SUPERFAMILY RING/U-box 50 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1674 Psa-Chr2 135459864 135460891 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1674 55 101 C3H Transcription Factor Family AT1G15100 53.191 1.38e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1674 K16282 - mtr:MTR_3g463010 140.198