Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1657 ATGGAGGTACACCTTCTGGATCAAGGCAACAGTTGGTTACAGAGTTTCAGGAAAAAAGATTCTATCAAGGCAGCAGTGCTATCTATCAAAGCTGGAGGTGTCGGGTTAACATTGACTGCTGCCAGCACCGTCCTCTTTGCAGAATTGTCTTGGACTCCTGGTGATCTATATCAGGCCGAAGACCGTGTTCATAGAATTGGACAGGTGTCTTCATAA 216 0.4583 MEVHLLDQGNSWLQSFRKKDSIKAAVLSIKAGGVGLTLTAASTVLFAELSWTPGDLYQAEDRVHRIGQVSS* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1657 71 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 12 71 - -
Psa2g1657 71 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 69 IPR027417 -
Psa2g1657 71 CDD SF2_C_SNF 13 68 - -
Psa2g1657 71 Pfam Helicase conserved C-terminal domain 12 67 IPR001650 -
Psa2g1657 71 Gene3D - 6 71 IPR027417 -
Psa2g1657 71 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 12 71 IPR030101 GO:0006281|GO:0031297|GO:0036310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1657 Psa-Chr2 133104126 133104742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1657 13 69 RAD5 or RAD16-like Gene Family AT1G02670 43.860 4.80e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1657 K14440 - fve:101292208 103.99