Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1653 ATGGATAATTTTTGCTGTTTGAAGTCTTCTTTCGCTAAGCTTGTATCCACGCGATCATCATGTAGCACGGGTAAAGGGAAAAATCATCAAGGGTCAATAAAGTATGGTTTCACCCTAGTGAAAGGGAGAGCTAATCATCCGATGGAGGATTACCATGTCGCCAAGTTCGTGCAGTTACAGGGAAAAGAATTGGGTTTGTTTGCTATTTATGATGGCCACTTGGGCGATAGTGTTCCTTCCTACTTACAGAAACATCTATTTTCCAACATTTTAAAAGAGGATGAATTTTGGGAGGACCCTGCTGCATCTATCTCAAAAGCGTATCTGAGCACAGATAAGGCAATTCTTTCACATAGTTCTGATTTGGGGCGTGGCGGATCAACAGCTGTAACTGCCATACTAATCAATGGTCAACTGTTATGGACGGCTAATCTAGGAGATTCACGAGCCGTTCTTTCAAGAAAAGGTCAAGCAGTGCAATTGACTACAGATCATGAGCCTAACACTGAACGCGGCAGCATTGAAAATAAAGGTGGTTTTGTCTCCAACATTCCAGGTGATGTACCTAGAGTAAACGGACAACTGGCTGTTTCTCGTGCATTTGGAGACAAAAGCCTCAAGTCTCATTTGCGGTCTGACCCCGATGTACAGAGGACCGAAGTAGATGTTGATATTGATATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGAGTAATCAAGAGGCAGTTGATATTGCTAGGAAGATGAGAGATCCACTGAAAGCAGCTAAGAATTTAACAGCTGAAGCATTAAAAAGAGACAGTAAAGATGATATATCTTGTGTTGTGGTTAGATTTAGGAGTTGA 852 0.4167 MDNFCCLKSSFAKLVSTRSSCSTGKGKNHQGSIKYGFTLVKGRANHPMEDYHVAKFVQLQGKELGLFAIYDGHLGDSVPSYLQKHLFSNILKEDEFWEDPAASISKAYLSTDKAILSHSSDLGRGGSTAVTAILINGQLLWTANLGDSRAVLSRKGQAVQLTTDHEPNTERGSIENKGGFVSNIPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQRTEVDVDIDILILASDGLWKVMSNQEAVDIARKMRDPLKAAKNLTAEALKRDSKDDISCVVVRFRS* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1653 283 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Psa2g1653 283 CDD PP2Cc 33 281 IPR001932 -
Psa2g1653 283 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 1 282 - -
Psa2g1653 283 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Psa2g1653 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Psa2g1653 283 SMART PP2C_SIG_2 45 281 IPR001932 -
Psa2g1653 283 SMART PP2C_4 30 279 IPR001932 -
Psa2g1653 283 Gene3D - 29 283 IPR036457 -
Psa2g1653 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1653 Psa-Chr2 132886638 132891053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1653 1 282 PP2C-type Phosphatase Gene Family AT1G22280 69.444 1.17e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1653 K17506 - gmx:100797292 481.485