Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1593 ATGGTTTCTAGCTTGGTTTTGATATTTCTATCAATATCTTCCCTGGCTTCAGCATCTCTCCAGGTTGGATTCTATGGCTACACATGTCCATCTGCTGAGACAATAGTGAGAAATACGGTTAACAAAGCTGTTTCACAAAACCCTGGCATAGGTGCTGGATTGATCAGAATGCATTTTCATGATTGCTTTGTGAGGCTCAGTGGTGGTACTATAAACTACGACGTACCATCGGGGCGAAGAGACGGCCGTGTCTCTATCGGAGACGAAGTGCCAAGAAATCTACCCGGACCCTCCTTGAACGCCGACCAACTCATCGCAAACTTTGCACAGAAAGGGTTATCAGCTGATGAAATGGTTACACTTTCCGGAGCACATTCAATTGGTGTATCACACTGTTCTTCATTCTCTAACCGTTTGTATTCATTTAGTAATACAAATGCTGTAGATCCTTCTATGGATCCTTCATTTGTTGAATCATTGAAAGCAAAGTGTCCAGCACCACCAAGTAGCGACGATCCATTAGTGGTTCTTGATGTTGGTACTCCTAATCGTTTGGATAGTGTTTACTATGAGGGATTGATTAACCATCGTGGTTTGTTGACTTCAGATCAAACGTTGTTGAGTGGTCAATCAACAAAAGAAAGTGTGGTAAATAATGCAAATTATGGTGCAAATTGGGCTAAGAAGTTTGCAGATGCTATGGTGCATATGGGTTCTATTGATGTGTTAAGTGGCTATGATGGTGAGATTAGGAAACATTGCAGCTTTGTCAATTAA 777 0.4157 MVSSLVLIFLSISSLASASLQVGFYGYTCPSAETIVRNTVNKAVSQNPGIGAGLIRMHFHDCFVRLSGGTINYDVPSGRRDGRVSIGDEVPRNLPGPSLNADQLIANFAQKGLSADEMVTLSGAHSIGVSHCSSFSNRLYSFSNTNAVDPSMDPSFVESLKAKCPAPPSSDDPLVVLDVGTPNRLDSVYYEGLINHRGLLTSDQTLLSGQSTKESVVNNANYGANWAKKFADAMVHMGSIDVLSGYDGEIRKHCSFVN* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1593 258 Gene3D Peroxidase, domain 2 95 237 - -
Psa2g1593 258 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g1593 258 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g1593 258 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g1593 258 Pfam Peroxidase 65 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g1593 258 CDD secretory_peroxidase 21 257 IPR033905 GO:0004601|GO:0042744
Psa2g1593 258 ProSiteProfiles Plant heme peroxidase family profile. 19 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g1593 258 SUPERFAMILY Heme-dependent peroxidases 20 258 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa2g1593 258 PANTHER PEROXIDASE 12 65 - -
Psa2g1593 258 PANTHER PEROXIDASE 69 256 - -
Psa2g1593 258 Gene3D - 69 258 - -
Psa2g1593 258 ProSitePatterns Peroxidases proximal heme-ligand signature. 117 127 IPR019793 -
Psa2g1593 258 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g1593 258 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g1593 258 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g1593 258 Gene3D - 20 67 - -
Psa2g1593 258 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Psa2g1593 258 PANTHER PEROXIDASE 25-RELATED 69 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g1593 258 PANTHER PEROXIDASE 25-RELATED 12 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1593 Psa-Chr2 125339279 125340596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1593 5 258 Peroxidase AT4G11290 33.123 2.68e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1593 K00430 - gmx:100786791 283.108