Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1592 ATGGCTAGGATCCAAAGAAAGCTCTTCCCAACAGAAACTACCTCAAACCAAACCTTAGATTGTTATGGCTTTTGTGATCCTTTATGTCCTTCAAATTGTTACACTAACACAAATTACTATTTCACACCCCCACCTTTAGAACATACTACACAAGTTAACCATATTGGCTCCTACTTCATCATCCTTATTTCATTATTCTCTTTGATTTTTATCATCATTGTTTTCTATATCATCAAAGTGAAATGCTATAATGAAATGTGTGGTTGGAGAATCAATAACTCCATTCGGTCTCAAGGCTTTAACAACGAAGAGCTTCTCAATGGAAATCGTGATCACGATCACCCCGTGTGGCTCATCGCCACGGTTGGTTTGCAACAATCAATTATAAACTCGATTACGGTTTGCAAGTATAGAAAAAACGAAGGGCTAATTGAAGGAACGGAATGTTCGGTTTGTTTGAGCGAGTTTCGTGAAGATGAAACTTTAAGACTATTGCCAAAGTGTAGTCATGCTTTTCACATTTCTTGTATTGATACTTGGTTGAGATCTCATACTAATTGTCCTCTTTGTCGAGCCGGCATTGTTTCCAACAACGTTACTCCTGAAGTAACGTTGTCGAATTCAGAACAAGAAAATAACAACTTCGGAAGAAACCAAGAGACTCAAATGGAGAATCCTAGGAATGATCAAGAGAATGTGTTAAACAACAATATTGCTATCAATGTTGCATTTGAAAACATGATTGGTGAATCAAGTGATGAATCATCTGAATCTAGAAGATATCATCAAGTTGTTGAGAAAGAGATGCACAAGGTTAGTGTTTGGAAGGCCATTACTCAAAAAAGTAGCAAAACAATGCGTCGATGTTCGATTGAAGAGCGTTTGCATGTAAAGCCGGTGGCTATGAAAAAGTCTTTAAATCTACATGGAAGGAAGAGTTTTAAAAAGAGATATGCGACTATGATTTGA 969 0.3695 MARIQRKLFPTETTSNQTLDCYGFCDPLCPSNCYTNTNYYFTPPPLEHTTQVNHIGSYFIILISLFSLIFIIIVFYIIKVKCYNEMCGWRINNSIRSQGFNNEELLNGNRDHDHPVWLIATVGLQQSIINSITVCKYRKNEGLIEGTECSVCLSEFREDETLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAGIVSNNVTPEVTLSNSEQENNNFGRNQETQMENPRNDQENVLNNNIAINVAFENMIGESSDESSESRRYHQVVEKEMHKVSVWKAITQKSSKTMRRCSIEERLHVKPVAMKKSLNLHGRKSFKKRYATMI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1592 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 199 IPR013083 -
Psa2g1592 322 MobiDBLite consensus disorder prediction 205 227 - -
Psa2g1592 322 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 5 252 IPR044675 -
Psa2g1592 322 CDD RING-H2_EL5_like 148 191 - -
Psa2g1592 322 ProSiteProfiles Zinc finger RING-type profile. 149 191 IPR001841 -
Psa2g1592 322 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 252 - -
Psa2g1592 322 SMART FANCL_C_2 145 198 - -
Psa2g1592 322 SMART ring_2 149 190 IPR001841 -
Psa2g1592 322 SUPERFAMILY RING/U-box 139 197 - -
Psa2g1592 322 Pfam Ring finger domain 148 191 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1592 Psa-Chr2 125184875 125186342 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1592 1 224 C3H Transcription Factor Family AT1G72220 42.537 8.81e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1592 - - mtr:MTR_5g064890 483.796