Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1584 ATGCAGAAGCATAATCACTTTACACTCTCAAGTTTGGATCATGGACAAATATGGCTCACTTTGTTGCTTGTTATTGCTGTCATTCAAATGTCACCGCCGGTGACATGTCAACCTATGGGACCGGAAGATCCGACTGAGAACAACAAATCAGTAGCAACCATAATGGGAATTATAGCCCTAATGTTCCTCTTCTCAGGCTTTCTTTCTCTCTACTCAGCCAAATGCAGTGATCGTCAGCAAGGAGTTATTTACGACCTCACTTTACCTAACGGTGCAAATGGTGTTAGGGCACAAATCAACGAGCCAAGTAACGGGTTAAACCAAGATGTCATCGACACTTTTCCGACTTTTCGTTACTCCAACGTGAAGGGACTCAAGATTGGGAAGAGCACTTTGGCTTGTGCTGTTTGTTTGAATGAGTTTCAAGACGACGAAACGCTGCGTTTAATACCGAAATGTAGCCATGTTTATCACCATGGTTGTATAGATATTTGGCTTGTTTCTCATAATACTTGTCCAGTTTGTCGTGCTAACCTTGTTCCGATACCCGACGAGGAGGCTACCGAGCCTCCGATTATATCCATACAGATACCAGAAGGAGAATTACATCATCACGAAGAAGAAGAAGAAGAAATAGAACATGTTGTTGAAGAGGAGCTAAAGCGAGACATAATTGAAGTTGAATATTCACCAAAGATAGATTTGCTTCGTAGATCCCAGACATATTCTGCACCAACACGGTCGAGATCGACAGGATTCTTATCTTCTCTTTTGTTATCACGGTCGAACTCGACGGGTGTGTTGGTGCAGCCAGGTGAGGATTGTGAGAGGTTTACACTTAGGCTACCCGATGAAGTTCGAAATCAGATGATGATGAAGACAACGTCGCTTAAGCGTGCGAAAAGCTGTGTGAGTTTTACGCGAATGAGCAGTGGAAAGTGTGGTTATAGGTCAAGAAGTTTTGGGTGTGGAAGTGGGAATGGTCAAGTGCAGTATGAAAGGTTTGGAAGTGAGGAGGAAGAAAATTTAGGGTTTGTTAGGAACAATTGGAATAATAAATCTGCAAGAAAATCTCATATGAAGTGTTTGGGAGTTGACATGGATAATAATGGTGAGAAGCGATCATATGATCTTTTAGGTCATGTGTAG 1149 0.423 MQKHNHFTLSSLDHGQIWLTLLLVIAVIQMSPPVTCQPMGPEDPTENNKSVATIMGIIALMFLFSGFLSLYSAKCSDRQQGVIYDLTLPNGANGVRAQINEPSNGLNQDVIDTFPTFRYSNVKGLKIGKSTLACAVCLNEFQDDETLRLIPKCSHVYHHGCIDIWLVSHNTCPVCRANLVPIPDEEATEPPIISIQIPEGELHHHEEEEEEIEHVVEEELKRDIIEVEYSPKIDLLRRSQTYSAPTRSRSTGFLSSLLLSRSNSTGVLVQPGEDCERFTLRLPDEVRNQMMMKTTSLKRAKSCVSFTRMSSGKCGYRSRSFGCGSGNGQVQYERFGSEEEENLGFVRNNWNNKSARKSHMKCLGVDMDNNGEKRSYDLLGHV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1584 382 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 323 - -
Psa2g1584 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 181 IPR013083 -
Psa2g1584 382 PANTHER RING FINGER DOMAIN-CONTAINING 9 323 - -
Psa2g1584 382 SUPERFAMILY RING/U-box 128 183 - -
Psa2g1584 382 SMART ring_2 134 175 IPR001841 -
Psa2g1584 382 CDD RING-H2_EL5_like 134 176 - -
Psa2g1584 382 Pfam Ring finger domain 133 176 IPR001841 -
Psa2g1584 382 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1584 Psa-Chr2 124033613 124035613 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1584 1 320 Rapid Response to Elicitors AT3G05200 36.556 7.48e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1584 K10664 - gmx:100814384 333.183