Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1545 ATGGCATCCAGTTTTGATTTTGCAAGTCTTCTTTGTACTGAAGACATAAGTTTTTTCGATGAAAATGATTTTAGGGGTTCAATGGAGGTTTTAGAGGAATCATGTCAAGTTGAATATGATCCTCCAAACCTTGATGAAACTCAGCAATTCGATGAATCAATTGGGTCGGTTCCACCATTGTTGAGTGGTGAGAGTTTGATGGCTTTGGTTGAAAAAGAATGCTTCCACATGCTTGGAAGTGATTATGGTAGTAGGTTGAAAATTTGGGATTTGGATTTGGATTTGGAGGGTAGAATGGAAGCCATTGATTGGATTCAAAAGGTTGGAATGCATTTTGGTTTTGGGCCTCTATGTGTGTATCTAACTGTGAACTTCATGGATCGCTTCCTTTCTGTGGTTGATATGCTAAAGGATAGAATATGGTCGATTCAACTCTTGGCTGTGGCTTCCTTGTATCTTGCAGCCAAAGTTGATGAGATCGCAGTTCCTCGATCTCTTGATATGCATATGAATGAAGAGAAGTATTTATTTGATAACAAAACAATACTGAAGATGGAGCTAATGATACTACACATATTGAATTGGAGAATGCAATCAATCACACCTTTCTCCTTTATTGACTACTTCCTTAATAGGATCAACAATGATTCTATTCCAACAGAAGATTCATTTTCGCAATCTTTCCAACTCATTATGAGGACTATAAGAGGGCTTGACTTCATTCAATTCAAGCCATCAGAAATCGCAGCAGCTGTTGCAATAACAATATCCACAAAAGGCGAAAACCGAACCATTGAAACTGATAAATCAGTTTCCCTTCTGACTAAATAG 831 0.3767 MASSFDFASLLCTEDISFFDENDFRGSMEVLEESCQVEYDPPNLDETQQFDESIGSVPPLLSGESLMALVEKECFHMLGSDYGSRLKIWDLDLDLEGRMEAIDWIQKVGMHFGFGPLCVYLTVNFMDRFLSVVDMLKDRIWSIQLLAVASLYLAAKVDEIAVPRSLDMHMNEEKYLFDNKTILKMELMILHILNWRMQSITPFSFIDYFLNRINNDSIPTEDSFSQSFQLIMRTIRGLDFIQFKPSEIAAAVAITISTKGENRTIETDKSVSLLTK* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1545 276 SMART cyclin_7 103 191 IPR013763 -
Psa2g1545 276 Pfam Cyclin, C-terminal domain 200 255 IPR004367 -
Psa2g1545 276 SUPERFAMILY Cyclin-like 63 197 IPR036915 -
Psa2g1545 276 Pfam Cyclin, N-terminal domain 93 197 IPR006671 -
Psa2g1545 276 ProSitePatterns Cyclins signature. 98 129 IPR006671 -
Psa2g1545 276 Gene3D - 79 198 - -
Psa2g1545 276 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 270 - -
Psa2g1545 276 SUPERFAMILY Cyclin-like 181 257 IPR036915 -
Psa2g1545 276 PANTHER CYCLINS 1 270 IPR039361 -
Psa2g1545 276 Gene3D - 68 257 - -
Psa2g1545 276 CDD CYCLIN 97 190 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1545 Psa-Chr2 119328335 119330194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1545 62 270 Core Cell Cycle Gene Families AT5G65420 44.286 4.01e-58 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1545 K18810 - gmx:100803873 279.641