Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1539 ATGATGTGGGAATGGGAACAAGACGAACACCACCACCACCGCCACCGCCACAACAACGCCTCTCCAAAACCCGATCAAATCCCTGACCCTAATTCCTATCTCAATTTCGATTTCTTCTCGGCTCTCTCCAAACCCAAGGATTATTACGAGATATTGGAAGTCGATTACGACGCTGATGAGGATGCTATTCGCTCTAATTACATGCGTCTTGCTCTTAAATGGCACCCTGATAAACAGAAAGACCAGAATTCTGCTACGTCAATGTTTCAGCATATAAACGAGGCATATCAGGTTTTAAGTGATCCTGATAAAAGGAGAGACTATGACATAAACGGGATGCGTCACGTAAACGATAATATCATTGATTATCTTAACCGTTACAAGGGTCTTATATTGACTTGCAATGGCCTCGGCGTAAAACAATCACTATGGTAA 435 0.4276 MMWEWEQDEHHHHRHRHNNASPKPDQIPDPNSYLNFDFFSALSKPKDYYEILEVDYDADEDAIRSNYMRLALKWHPDKQKDQNSATSMFQHINEAYQVLSDPDKRRDYDINGMRHVNDNIIDYLNRYKGLILTCNGLGVKQSLW* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1539 144 Gene3D DnaJ domain 39 126 IPR036869 -
Psa2g1539 144 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 144 - -
Psa2g1539 144 SMART dnaj_3 46 104 IPR001623 -
Psa2g1539 144 Pfam DnaJ domain 47 109 IPR001623 -
Psa2g1539 144 ProSitePatterns Nt-dnaJ domain signature. 89 108 IPR018253 -
Psa2g1539 144 SUPERFAMILY Chaperone J-domain 43 119 IPR036869 -
Psa2g1539 144 ProSiteProfiles dnaJ domain profile. 47 112 IPR001623 -
Psa2g1539 144 CDD DnaJ 47 101 IPR001623 -
Psa2g1539 144 PRINTS DnaJ domain signature 49 67 IPR001623 -
Psa2g1539 144 PRINTS DnaJ domain signature 67 82 IPR001623 -
Psa2g1539 144 PRINTS DnaJ domain signature 84 104 IPR001623 -
Psa2g1539 144 PRINTS DnaJ domain signature 104 123 IPR001623 -
Psa2g1539 144 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1539 Psa-Chr2 118828507 118831867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1539 40 109 C2H2 Transcription Factor Family AT1G74250 42.667 5.22e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1539 - - gmx:100804409 206.068