Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1529 ATGTTCTCAAACTTTCAACAACAGCAACACCACAACCTTTTTCAATCCCCTCGTGAATGCCAAACCTCAGAAGACGATGAAAGCCGAGGCAGCGGTGGCCCCGGCACATTAACAGCCCACAAACCTTTCTCCGCAATAAGCGGAAGCAGCGACGGTGCTACTATTGAGATTGGCCGTAGGCCCAGAGGCCGTCCACCGGGGTCCAAGAACAAGCCCAAATCCCCTCTCATAATTACTCATGACCCCGAGCCCGCGATGAGCCCACACATTCTTGAAATCCCAGGAGGCAGCGATATCGTTGAAGCAATAGCCCGGTTCAGTAACAGAAGAAAAACCGGACTATGCATATTAACCGGTTCAGGTGCAGTCGCTAACGTTACACTTCGTCAACCTTCTGCTCCTCCAGGAACCACCGTTATTTTTCACGGCCGTTTCAATATTCTCTCTATATCCGCCACGTTCTTCGTCCCATCAGAATCCTCACCGCCGGTGCATAAAGAATTCTCGATCTCCCTTGCCGGACCTCAGGGTCAGATTATCGGAGGGTTTGTTGTTGGAAGGTTGCTAGCTGCCGGTACGGTGTTTGTGATTGCTGCTTCGTTTAATAACCCTACTTATCATAGGCTACCTTTGGAAGAGGATATTCAGAATAACTCAGTTTCCGGCGGTTGTGATGAGAAGTCGCCGCATATGTCCGGTGGTGAGTCGTGTATGTATAGCTGTCAACTTCCATCGGAAGTGATTTGGGCTCCAACGCCAAGAGTGCATTTCTGA 774 0.5013 MFSNFQQQQHHNLFQSPRECQTSEDDESRGSGGPGTLTAHKPFSAISGSSDGATIEIGRRPRGRPPGSKNKPKSPLIITHDPEPAMSPHILEIPGGSDIVEAIARFSNRRKTGLCILTGSGAVANVTLRQPSAPPGTTVIFHGRFNILSISATFFVPSESSPPVHKEFSISLAGPQGQIIGGFVVGRLLAAGTVFVIAASFNNPTYHRLPLEEDIQNNSVSGGCDEKSPHMSGGESCMYSCQLPSEVIWAPTPRVHF* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1529 257 MobiDBLite consensus disorder prediction 1 19 - -
Psa2g1529 257 Gene3D - 87 222 - -
Psa2g1529 257 ProSiteProfiles PPC domain profile profile. 83 222 IPR005175 -
Psa2g1529 257 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 203 IPR005175 -
Psa2g1529 257 PIRSF ESCAROLA 2 246 IPR014476 GO:0003680
Psa2g1529 257 SUPERFAMILY AF0104/ALDC/Ptd012-like 85 213 - -
Psa2g1529 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 6 254 - -
Psa2g1529 257 CDD DUF296 88 201 IPR005175 -
Psa2g1529 257 MobiDBLite consensus disorder prediction 1 75 - -
Psa2g1529 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 6 254 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1529 Psa-Chr2 117311349 117313344 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1529 36 254 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 56.667 3.00e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1529 - - cam:101500910 390.193