Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1521 ATGCAGAACGCAACTCGATTAGAAGCAGAACGGTTACTTGGAATATCAGAGAAGCTCTTACAGAATCGAGATCTAATGGGTTCTAAAGAATTCGCAATCTTAGCTCAAGAAACGGAACCTCTTCTGGAAGGTTCCGATCAGATCTTAGCCATTATCGATGTTCTCATCGCCTCTGAGAAACGCATCAACAACAGCCCTGACTGGTACTCTATCCTTCAAATCGATCGCCGATCCGACGACAGTGACCTCATCAAGAAACAGTACCGCCGTCTCGCTCTTCTTCTACATCCGGACAAAAGCAGGTTTCATTTCGCTGATCATGCTTTCAAGCTTGTTGCTGATGCTTGGGCGGTTCTCTCCGATCCAATCAAAAAGTCTCACTATGATAAAGAGTTTTCGTTTTACTCTCGGGTTGATTTATCTGTTCCCGGTTGGGTTCAGCAAGATAAGGTGCCAGGGCCGGTTCGAAGAACCGGTCCTGGCCCCAGCCCCGTACCTGGACCGGAAATTGGAACCGGTCCACGGAACAGTGCTGCTTCTGCTAGAGATGGAATAGCTGCTGATGAAAACGCGCGTCGTAGGAACGCGACTTTTTGGACTGCTTGTCCTTACTGTTATCGTTTGTATGAGTTCCCTAGGGTTTACGAGGGTTTCTGTTTGAAATGTCCTAATTGTGAAAGATCTTTTCATGGTGTTAATATTCCGTCTTTGCCTCCGTTAGTTCCGGGACAAGATGCTTATTATTGTTGCTGGGGTTTTTTTCCAATGGGTTTTGTGCTTGGGAATGTTGGTTCAGAGGAGAAAAAGCCTGAGATGGTTCCTGAAGCTGTGCCGGAGCCAGAGACGGTTCCGGTGCCAATATCAGTTCAGCCTGCTTCTGTTCAGCCTGCTCCAGTTCAGCCTGCTTCGTTTCAGTATGCTCCTGCTTCGTCGCTGCCGAATTGGATGCCGGCGCCTGTACCAGTGGAGAATGGTGGGAACAATGTAATGCCGGTGGCACCGATGGAAGTTGTGGTTGCTACGCCTGCAAGGGTGACGACGAGATCAGCTGCTGTAACAGGGGTTGTTTTGAATGGTGTTGCTGCCAGGGGTTCGGGATCTGGTAAGAAGCGTGGAAGGCCGAGGAAGTATTATTAA 1137 0.4881 MQNATRLEAERLLGISEKLLQNRDLMGSKEFAILAQETEPLLEGSDQILAIIDVLIASEKRINNSPDWYSILQIDRRSDDSDLIKKQYRRLALLLHPDKSRFHFADHAFKLVADAWAVLSDPIKKSHYDKEFSFYSRVDLSVPGWVQQDKVPGPVRRTGPGPSPVPGPEIGTGPRNSAASARDGIAADENARRRNATFWTACPYCYRLYEFPRVYEGFCLKCPNCERSFHGVNIPSLPPLVPGQDAYYCCWGFFPMGFVLGNVGSEEKKPEMVPEAVPEPETVPVPISVQPASVQPAPVQPASFQYAPASSLPNWMPAPVPVENGGNNVMPVAPMEVVVATPARVTTRSAAVTGVVLNGVAARGSGSGKKRGRPRKYY* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1521 378 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 376 - -
Psa2g1521 378 Pfam DnaJ domain 67 129 IPR001623 -
Psa2g1521 378 CDD DnaJ 67 121 IPR001623 -
Psa2g1521 378 Gene3D DnaJ domain 55 139 IPR036869 -
Psa2g1521 378 SMART dnaj_3 66 124 IPR001623 -
Psa2g1521 378 MobiDBLite consensus disorder prediction 155 182 - -
Psa2g1521 378 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Psa2g1521 378 PRINTS DnaJ domain signature 69 87 IPR001623 -
Psa2g1521 378 PRINTS DnaJ domain signature 88 103 IPR001623 -
Psa2g1521 378 PRINTS DnaJ domain signature 104 124 IPR001623 -
Psa2g1521 378 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 376 - -
Psa2g1521 378 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
Psa2g1521 378 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1521 Psa-Chr2 116365286 116367337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1521 2 375 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.421 2.70e-97 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1521 - - gmx:100816918 458.373