Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1520 ATGATAAAAAGGTGCCGAGCCAATTCTACCTTATCGGTACAGACAATTACAAGGAATCTATCAAGACACTTATCAAAGGATAAGGGTGCATTTCAGGCAGTTCAATTAGATGGTTCAAGGTCCAGGAAGGGTCAACCCATTGTTCTCGATGATGATGACAGTGACGACAGCGACGATCCTCATGTTTTAGAGAAAACAGAAAACAAAGCTCCTGAATACTTGAAAGATGCTAAGATCTATTTTCCTTCAAGAGAATCCCATGAAAAAGCTATTGAAGTTTACTCATCCTGGAATAGTTGTTGTTGTTATCAAGCCAAGTGTTGTTGTTTGAGTCTCTCTGCTTATACTCAGTTTCCTAGTTATCTTGAAGTTCGGAGGTTAAGTATATTCAAACTGTTAGATGCCAGTAGAACCAGTGACAAGCTCAACCACTTTTCAGCCGCCGTCACCCAGGATGAAGTACTTGCAGTTACGGTATCACCTGAAACCAATAAAAAAGCTTTTGTTTGGTGTTTATGGTTGGGATTATTGGAATTATCATATGGAGAAACAATCAGACACTACAACTTCGATGTGGAATACATGATCAAAAAACCAGATTGTTTAGAACATGTTGTGATGGGAATCAACGATCAGTTTCCAGGTCCAACTATTTCAGCTCAAGTTGGTGACACTCTTGCCATTTCACTCACCAATAAGCTTTCTACGGAAGGAACTGCAACCTGTGCTGCTGTGGATTTTACACCGCATGTGGTTACTGTTAATACCGGAGAGGATGTTGGCGGGAAGATCTTGTCATTTGCGCAGAAGAGTCCAAGAGCGATATGCATTCTTTCTGCCAATGGAGCTATCTCTAAAGTCACACTACGTCAACTCGGTTCTTCCGGTGGTGGTATTTTGACTTATGAGGGTCGGTTTGAGATCTTATCTTTGTCTGGATCATATACGGTCTCAGACACTAGCGACATAAGAACTCGCGATGGTGGATCGAGTGTCTCACTTGCTGGTCCTGACGGCCGAGTGATCGGAGGTTCTGTTGCTGGTCTACTTACAGCTGCTGGTCCTATCCAAATTGTAGTTGGAAGTTTCACGCCATATGCTAACAAGATGCTTAAAAAGAAGTACCAACGGGAACACACGGTGTCTTCTCCAACTTCAACTGGTCCAGAAATCATGACAGCAGCAAGACCTATCTCACAAGCAAATGCTCATGCTGAAAACTTCATGATACCGATTTTGTCTCAGTTACCCGATCATCAAAACCAGAGCTGTAATCAAACCAAAGCTCCATTTTTTTCACTGCGGTAA 1308 0.4228 MIKRCRANSTLSVQTITRNLSRHLSKDKGAFQAVQLDGSRSRKGQPIVLDDDDSDDSDDPHVLEKTENKAPEYLKDAKIYFPSRESHEKAIEVYSSWNSCCCYQAKCCCLSLSAYTQFPSYLEVRRLSIFKLLDASRTSDKLNHFSAAVTQDEVLAVTVSPETNKKAFVWCLWLGLLELSYGETIRHYNFDVEYMIKKPDCLEHVVMGINDQFPGPTISAQVGDTLAISLTNKLSTEGTATCAAVDFTPHVVTVNTGEDVGGKILSFAQKSPRAICILSANGAISKVTLRQLGSSGGGILTYEGRFEILSLSGSYTVSDTSDIRTRDGGSSVSLAGPDGRVIGGSVAGLLTAAGPIQIVVGSFTPYANKMLKKKYQREHTVSSPTSTGPEIMTAARPISQANAHAENFMIPILSQLPDHQNQSCNQTKAPFFSLR* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1520 435 Gene3D - 249 383 - -
Psa2g1520 435 SUPERFAMILY Cupredoxins 167 237 IPR008972 -
Psa2g1520 435 SUPERFAMILY AF0104/ALDC/Ptd012-like 247 368 - -
Psa2g1520 435 Pfam Plants and Prokaryotes Conserved (PCC) domain 249 364 IPR005175 -
Psa2g1520 435 ProSiteProfiles PPC domain profile profile. 244 387 IPR005175 -
Psa2g1520 435 Pfam Multicopper oxidase 195 239 IPR011707 GO:0005507
Psa2g1520 435 CDD DUF296 248 363 IPR005175 -
Psa2g1520 435 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 239 426 - -
Psa2g1520 435 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 239 426 IPR039605 GO:0003680
Psa2g1520 435 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1520 Psa-Chr2 115982704 115985192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1520 246 421 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.180 2.80e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1520 - - gmx:100779227 248.825