Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1513 ATGGAGAGAAAACGTTCTTTTTCTACTATCAACAACAACAGCTTCAAAAAGACGTTACAAATAAGAAACAATCAAAACAAGAACAAGCCTTCTTTCACCAAAGAAGATTCTGCAATTCTCTTGAAAAGGTACGACGCAAGGACGGTGTTGATGCTGTTGCAGGAAGTGGCGAGTAATGCAGGATGGAAGATTAATTGGAAGGAGATGGTGAAGAAAACTTCCACCGGTATTTCGAGTGTGAAAGAGTATCGAATTCTGTGGCGGCATTTGGCGTATGGCCATTCCTTGATTGATGATGATTTTCAAGATCTGGATGATGATAGTGATTTGGAGTGTGAGCGGAAATCATTCCCACCTATATCCAAGGAAAATGAATCGCAAGCTGCAGCATGTGTAATGATTGAATCTGTTACAATGAGTGAATCAGCACCAAGTAGTTCAATAATTGAAGCTCCATTGCCTATAAAAGTTGCTTCATCTAATTTAGCAGAAGAGACAGAAATTAGTTTTCCAGTTACTGTGGATAGACAAACAAGGATAAATAATAGTAATGCATTATCAAATGTAAGAAAAGGAGGATGGTCAAAGGAAGAGGACATGGAATTACAAGCTGCTGTTGAGAAATGGGGTGAAGGGAATTGGACAGAAATGGCTGCAAGAGATGATTTTCCTCTTAATAGAACTGCTGCACAGTTGTCTAAGAGGTGGAGAATTTTAAGAAATAAATTTTGGCAGCAATGA 741 0.386 MERKRSFSTINNNSFKKTLQIRNNQNKNKPSFTKEDSAILLKRYDARTVLMLLQEVASNAGWKINWKEMVKKTSTGISSVKEYRILWRHLAYGHSLIDDDFQDLDDDSDLECERKSFPPISKENESQAAACVMIESVTMSESAPSSSIIEAPLPIKVASSNLAEETEISFPVTVDRQTRINNSNALSNVRKGGWSKEEDMELQAAVEKWGEGNWTEMAARDDFPLNRTAAQLSKRWRILRNKFWQQ* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1513 246 SMART sant 190 242 IPR001005 -
Psa2g1513 246 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 24 242 - -
Psa2g1513 246 SUPERFAMILY Homeodomain-like 188 243 IPR009057 -
Psa2g1513 246 Pfam Myb-like DNA-binding domain 191 237 IPR001005 -
Psa2g1513 246 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 24 242 - -
Psa2g1513 246 ProSiteProfiles Myb-like domain profile. 186 240 IPR001005 -
Psa2g1513 246 Gene3D - 184 242 - -
Psa2g1513 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 186 244 IPR017930 -
Psa2g1513 246 CDD SANT_TRF 194 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1513 Psa-Chr2 115479644 115480989 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa2g1513 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1513 - - cam:101491410 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1513 2 115479644 115480989 Psa5g1147 5 89356163 89368982 PCT