Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1509 ATGCCTCACAGAGCAACTTACTTTTTTCCTAGGCAATTTCCAGAGAAAAGATTGGATGAATCATCAAACAAGATTTTAGATCACGAGAAGAAAAAACTCGGAGTCAATTCAACGGATACTACTTTTTGCATTGAAAATGACTCACCCAAAAGCTCTTTTGTTACTACAACTTCTAATAAAGATGACGTCGTTTCCTCTCCAGCTAAAAACTCAGCTGTTTCTGATCTTCTTAGTACCGGCGGTAAGTTCCGATGCGAACAGAAGCAGATTGCTGCGTTTTGTGATTGGTTGGTTGATAAACGACATACTCATCATGCTCATCACCCTCATCACCATCACCGTCGTCACCATCCTCATCAGCATCATCACCGTCACCGATCGGATCAAGAGCCTCTGCTTCCGGATTTGCATGCGTCGGAAAAGGATGCTGTTGATCGGAGCTTTGATCGGGAGGTTTCGCTTCCGAGATTGTCAAGTGGAAGCAGTTATGCTGCGAGTTTGTTTGCGTCGGATGTTACCGTTACTGCTACATTCTCCAGTGATGACATTACGAGAGAAGATACGTCGTTGTTTCGTGTTTCTACAAATGGCGCTAAAAGAAGTAACGAACAACATCAACAAAAGGAGGAAGAAGAAGAACATGAAGAAGAAGAAAAATGCAGCGAAGAGAACTACGCAAGGAAGTATAAAGAAAGCTATGAACTACAACTTGCTTTGGCGAAGAGGCTTTCTTTCTTGTCAAGTTTTGGTTCTGAACCGGTTCTCACTTTCGATACTGGATTAGAAACTTGGGACGTTGAATCTGTTTCTCGTCGTTTATGGGTGACGGGGTATTTGTCTTACACCGATAAGATTTCGGATGGATTTTATAACATATTGGGAATGAATCCGTATTTGTGGTTGATGTGTAATGACATGGAGGAAGAAGGGAATTGCCTTCCGACGTTGATGGCGCTTAGAGCGGTTGAACCCAATGAGAGTTCATTGGAAGTGATTCTTATTGATAGACGAGAGGACTCTCGTCTTAAGGTACTTCAAGATAAAGCTCAAGAGCTGTATTCTGCTTCTGAGAATACATTGATGCTAGTTGAAAAGCTCGGAAAACTTGTTGCTATCTTTATGGGGGGCACCTTCCCTATGGAGCAAGGGGATATGCAAAGGAGGTGGCAGATGGTCAGTAAGAAGTTGAGGAATTTTCATCAGTGTGTTGTGCTTCCCATTGGTAGTTTGTCTACGGGAATCTGTAGGCATCGTGCAATTCTCTTCAAGAGATTGGCAGATTATATAGGTTTGCCATGCCGCATTGCTCGAGGTTGCAGGTACTGTGCATCGGATCATCAGTCATCTATTCTTGTCAAGATTAAAGATGACAGACAACTGTCAAGGGAGTATGTTGTTGACCTGGTTGGGGATCCAGGAAATATTCTTGGGCCAGATTCATCAATTAATGGAGCATATGTGTCTTCCACACCTTCCCCATTTCAAATTTCTCATTTGAGAAAATCTCAATCGCCCTATGTGGATGATGCAGCATCTCAAGTTATAGGTTTTAATCAGATATCTCCTCAAGTTATAGGATTTAATCAGATTTCTCCCAACAATCATCTGTATTCAGGCCGTTTACAGGACGAACAACAAAGTAAAGAAACTGATTTGCTGAAAAATAGTAATGGCTTCATTTATGCTTCAGTCGATCAAACTTGTGGAGGTCCTTCTGAAGCTCTTCGCCCAGCCTCTGAAGCATTATTACATGACATTCCATTTGTTGGTAAAGATTCAGTTGTAGTCCAAGAAATTTCTTATAATGAGATCATTGCAAAGGGAAGTTCGGTGGTAAATGGTATCCAGTTAAAGCAAGAACAGGTAGACAGTAGACAGGGTGCTGGTGATATTCCAAAATATGTAAATCTTGAACCATCACTAGCAATGGACTGGCTTGAGATATCATGGGATGAGCTACGGATCAAAGAGCGCGTTGGTGCTGGATCATTTGGGACAGTGTACCGTGCCGAATGGCATGGATCAGATGTTGCTGTCAAAGTTTTATCAGTTCAGAATTTTCATGATGATCAGTTAAAAGAATTTTTGAGAGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTGGTTCTCTTCATGGGTGCAGTTACAAAACGTCCTCATCTATCTATAGTGACAGAGTATTTGCCTAGAGGTAGTTTATTCCGCCTGATACATAGACCAGTGTCGAATGAAATTCAGGATCCAAGGAGAAGATTGCGAATGGCTATAGATGTGGCTAAAGGGATCAATTATCTCCATTGTCTGAAGCCTCCAATTGTGCACTGGGATCTCAAATCTCCAAACCTTTTAGTAGACAAAAATTGGAATGTAAAGGTGTGTGATTTTGGGTTGTCCAGATTTAAGGCAAACACTTTCTTGTCATCAAAATCTGTTACAGGAACGCCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTACAAATGAGAAATCTGATGTATACAGTTTTGGAGTTATCCTGTGGGAACTCTTGACCTTACAGCAGCCATGGGATGGACTTAGCCATGCCCAGGTGGTTGGAGCTGTGGCATTCCAGAATAGGAGACCTTCTATCCCTTCAAACATCTCTCCAGTATTAGCCTCCCTAACGGAATCTTGTTGGGCGGATAACCCAGCTGATCGCCCATCTTTTGCTAGCATAGTTGAGACGCTAAAGAAGCTGCTAAAGTCACCCGCAGATGCCATAAAAATGGGTGGAACATAA 2772 0.4224 MPHRATYFFPRQFPEKRLDESSNKILDHEKKKLGVNSTDTTFCIENDSPKSSFVTTTSNKDDVVSSPAKNSAVSDLLSTGGKFRCEQKQIAAFCDWLVDKRHTHHAHHPHHHHRRHHPHQHHHRHRSDQEPLLPDLHASEKDAVDRSFDREVSLPRLSSGSSYAASLFASDVTVTATFSSDDITREDTSLFRVSTNGAKRSNEQHQQKEEEEEHEEEEKCSEENYARKYKESYELQLALAKRLSFLSSFGSEPVLTFDTGLETWDVESVSRRLWVTGYLSYTDKISDGFYNILGMNPYLWLMCNDMEEEGNCLPTLMALRAVEPNESSLEVILIDRREDSRLKVLQDKAQELYSASENTLMLVEKLGKLVAIFMGGTFPMEQGDMQRRWQMVSKKLRNFHQCVVLPIGSLSTGICRHRAILFKRLADYIGLPCRIARGCRYCASDHQSSILVKIKDDRQLSREYVVDLVGDPGNILGPDSSINGAYVSSTPSPFQISHLRKSQSPYVDDAASQVIGFNQISPQVIGFNQISPNNHLYSGRLQDEQQSKETDLLKNSNGFIYASVDQTCGGPSEALRPASEALLHDIPFVGKDSVVVQEISYNEIIAKGSSVVNGIQLKQEQVDSRQGAGDIPKYVNLEPSLAMDWLEISWDELRIKERVGAGSFGTVYRAEWHGSDVAVKVLSVQNFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHRPVSNEIQDPRRRLRMAIDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWNVKVCDFGLSRFKANTFLSSKSVTGTPEWMAPEFLRGEPTNEKSDVYSFGVILWELLTLQQPWDGLSHAQVVGAVAFQNRRPSIPSNISPVLASLTESCWADNPADRPSFASIVETLKKLLKSPADAIKMGGT* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1509 923 ProSiteProfiles Protein kinase domain profile. 653 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1509 923 SMART serkin_6 653 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1509 923 MobiDBLite consensus disorder prediction 194 222 - -
Psa2g1509 923 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 129 921 - -
Psa2g1509 923 MobiDBLite consensus disorder prediction 105 130 - -
Psa2g1509 923 CDD STKc_MAP3K-like 659 907 - -
Psa2g1509 923 Gene3D Transferase(Phosphotransferase) domain 1 732 919 - -
Psa2g1509 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Psa2g1509 923 ProSitePatterns Protein kinases ATP-binding region signature. 659 680 IPR017441 GO:0005524
Psa2g1509 923 Pfam Protein tyrosine and serine/threonine kinase 653 907 IPR001245 GO:0004672|GO:0006468
Psa2g1509 923 SUPERFAMILY Protein kinase-like (PK-like) 635 907 IPR011009 -
Psa2g1509 923 PRINTS Tyrosine kinase catalytic domain signature 727 740 IPR001245 GO:0004672|GO:0006468
Psa2g1509 923 PRINTS Tyrosine kinase catalytic domain signature 768 786 IPR001245 GO:0004672|GO:0006468
Psa2g1509 923 PRINTS Tyrosine kinase catalytic domain signature 834 856 IPR001245 GO:0004672|GO:0006468
Psa2g1509 923 PRINTS Tyrosine kinase catalytic domain signature 878 900 IPR001245 GO:0004672|GO:0006468
Psa2g1509 923 Pfam Ethylene-responsive protein kinase Le-CTR1 266 475 - -
Psa2g1509 923 Coils Coil 198 224 - -
Psa2g1509 923 MobiDBLite consensus disorder prediction 105 124 - -
Psa2g1509 923 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 129 921 - -
Psa2g1509 923 Gene3D Phosphorylase Kinase; domain 1 646 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1509 Psa-Chr2 115337206 115344168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1509 1 922 MAP Kinase Kinase Kinase AT4G24480 54.892 0.0 974
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Psa2g1509 PK_Tyr_Ser-Thr 1.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1509 - - gmx:100786546 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1509 2 115337206 115344168 Psa5g1156 5 90338941 90346066 PCT