Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g1502 | ATGATCATGAACTACGTAACTCTAGTATACACTCATCTAAAATGGATATTAAATTTCCTTATATATTATCCATTTTATAACCTCCATGATTCTCATTATCCTCCAATAATTGGAGAGATATACAATACACACAATTATGAACCCACCACCCTTGAATCAGAATGTGCTGTGTGTCTATGCAAAGTACAAGAAGAAGATGAGATTGAAATGTTAAGGTGTGGTCATATGTATCATAAAGATTGTTTGGATAAATGGGTTGGATTCAAAAACCATACTTGTCCTCTTTGCAGAGAATCATTGAGACCAAAAAGGGTCATCACTGAGATTGGAGCTGAAGTTCTTGCATTTGATTTTTGGACCGTTCGGGAGGATCGAGATCGCGAGGATTGGTGGCTACGTTGA | 402 | 0.3682 | MIMNYVTLVYTHLKWILNFLIYYPFYNLHDSHYPPIIGEIYNTHNYEPTTLESECAVCLCKVQEEDEIEMLRCGHMYHKDCLDKWVGFKNHTCPLCRESLRPKRVITEIGAEVLAFDFWTVREDRDREDWWLR* | 134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g1502 | 133 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED | 2 | 124 | - | - | |
Psa2g1502 | 133 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 39 | 104 | IPR013083 | - | |
Psa2g1502 | 133 | SMART | ring_2 | 55 | 96 | IPR001841 | - | |
Psa2g1502 | 133 | ProSiteProfiles | Zinc finger RING-type profile. | 55 | 97 | IPR001841 | - | |
Psa2g1502 | 133 | SUPERFAMILY | RING/U-box | 38 | 105 | - | - | |
Psa2g1502 | 133 | Pfam | Ring finger domain | 54 | 97 | IPR001841 | - | |
Psa2g1502 | 133 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 2 | 124 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g1502 | Psa-Chr2 | 114650250 | 114650915 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g1502 | 52 | 100 | C3H Transcription Factor Family | AT2G04240 | 55.102 | 8.50e-15 | 65.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g1502 | K16282 | K16285 | mtr:MTR_3g463010 | 135.961 |