Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1502 ATGATCATGAACTACGTAACTCTAGTATACACTCATCTAAAATGGATATTAAATTTCCTTATATATTATCCATTTTATAACCTCCATGATTCTCATTATCCTCCAATAATTGGAGAGATATACAATACACACAATTATGAACCCACCACCCTTGAATCAGAATGTGCTGTGTGTCTATGCAAAGTACAAGAAGAAGATGAGATTGAAATGTTAAGGTGTGGTCATATGTATCATAAAGATTGTTTGGATAAATGGGTTGGATTCAAAAACCATACTTGTCCTCTTTGCAGAGAATCATTGAGACCAAAAAGGGTCATCACTGAGATTGGAGCTGAAGTTCTTGCATTTGATTTTTGGACCGTTCGGGAGGATCGAGATCGCGAGGATTGGTGGCTACGTTGA 402 0.3682 MIMNYVTLVYTHLKWILNFLIYYPFYNLHDSHYPPIIGEIYNTHNYEPTTLESECAVCLCKVQEEDEIEMLRCGHMYHKDCLDKWVGFKNHTCPLCRESLRPKRVITEIGAEVLAFDFWTVREDRDREDWWLR* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1502 133 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 2 124 - -
Psa2g1502 133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 39 104 IPR013083 -
Psa2g1502 133 SMART ring_2 55 96 IPR001841 -
Psa2g1502 133 ProSiteProfiles Zinc finger RING-type profile. 55 97 IPR001841 -
Psa2g1502 133 SUPERFAMILY RING/U-box 38 105 - -
Psa2g1502 133 Pfam Ring finger domain 54 97 IPR001841 -
Psa2g1502 133 PANTHER RING ZINC FINGER PROTEIN-RELATED 2 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1502 Psa-Chr2 114650250 114650915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1502 52 100 C3H Transcription Factor Family AT2G04240 55.102 8.50e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1502 K16282 K16285 mtr:MTR_3g463010 135.961