Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1499 ATGTCCCCTTCTCCACAAAAAGAACAAGAATTCATATTCCGTTCTAAACTTCCAGACATTGTAATCCCAACTCACCTTCCATTACACTCTTACTGTTTCCAAAACCTCTCTCAATTCCACAACCGTCCATGCCTCATCAACGGCCACACCGGCGAAACCTTCACTTACTCCGACGTCCATCTCAACGTCCGCAAAATTGCTTCCGGTTTAAACTCCATCGGAATCCATCAAGGTGACGTCATCATGCTCGTCCTCCGTAACTCATTTCAATTCGCCCTCACTTTCCTCGGTGCCTCGTATCGCGGCGCCGTCATCACCACTGCCAATCCATTCTACACCTCATCAGAACTATCTAAACAAGCCACCGCAACGAAAACGAAACTCATCGTAACTCAATCATTGTACGTCAGTAAAATCAAAGAATTCGCTAAAATGAACAACATCAAAATCGTGTGCACTGATGATTCACCATCATCATTGGAAGAAAATGTTGTTGATTTCTCAGTTTTAACAAATGCTGATGAAAACGAAGCACCGGAAGTGAAAATAAACGCTAACGACGTGGTTGCGTTACCGTTTTCTTCAGGAACTTCTGGACTTCCAAAAGGAGTTATGTTAACCCATGAGAATTTAGTTACAACAATATCAGAGTTAGTTGACGGTGAAAATCCTCACCAATACACTAACGAAGAGGATGTGTTACTCTGTGTTCTACCTATGTTTCATATCTATGCGCTCAATTCGATTTTACTGTGTGGAATTCGTTCTGGTGCTGCGGTATTGATTTTGGAGAAATTTGAGATTAAAACGGTTTTAGAGTCGATTGATAAGTATAAAGTGACGATAGTGTCTTTTGTGCCACCTATTGTTTTAGCGTTGGTAAAGAGTGGAGAGTTACATCGATACGACTTGTCGTCTATTAGAGTGATGATAACGGGTGCTGCACCCATGAGAATGGAACTTGAACAAGCTGTCAAGGATAGGATGCCACAAACTGTGCTTGGACAGGGATATGGAATGACGGAGGCAGGACCACTTTCTGTTAGCTTAGCATTTGCAAAGGAACCGTTTAAGGCAAAACCCGGTGCATGCGGCACGGTGGTGAGAAACGCCGAGATGAAAATAGTCGACATAGAAACCGGTGCTTCTCTACCAAGAAACAAAGCGGGTGAAATTTGCATTAGAGGCACAAAAGTTATGAAAGGATACCTAAATGATCCTGAGGCTACAAAGAAAATTATAGACAAAGATGGATGGCTACACACAGGTGACATTGGATTAATGGATGATGATGATGAACTTTTCATTGTTGATCGATTAAAGGAATTGATTAAATACAAAGGATATCAAGTTGCTCCTGCTGAACTTGAAGAATTGTTGATTGCTCACCCAGATATTTCTGAAGCTGCTGTTGTACCATTGAAAGATGAAGATGCTGGAGAAGTCCCAGTTGCATTTGTTGTTAGATCAAGTGGTTCAAAGATCAGTGAGGATGAAATCAAGCAATATATATCCCAACAGGTTGTATTTTACAAGAGAATAAATAAAGTTTACTTCACCGAAGCTATTCCTAAAGCAGTCTCCGGCAAAATTCTGCGAAAGGAATTAACTGCAAGACTAATGAAGGACTAG 1632 0.4124 MSPSPQKEQEFIFRSKLPDIVIPTHLPLHSYCFQNLSQFHNRPCLINGHTGETFTYSDVHLNVRKIASGLNSIGIHQGDVIMLVLRNSFQFALTFLGASYRGAVITTANPFYTSSELSKQATATKTKLIVTQSLYVSKIKEFAKMNNIKIVCTDDSPSSLEENVVDFSVLTNADENEAPEVKINANDVVALPFSSGTSGLPKGVMLTHENLVTTISELVDGENPHQYTNEEDVLLCVLPMFHIYALNSILLCGIRSGAAVLILEKFEIKTVLESIDKYKVTIVSFVPPIVLALVKSGELHRYDLSSIRVMITGAAPMRMELEQAVKDRMPQTVLGQGYGMTEAGPLSVSLAFAKEPFKAKPGACGTVVRNAEMKIVDIETGASLPRNKAGEICIRGTKVMKGYLNDPEATKKIIDKDGWLHTGDIGLMDDDDELFIVDRLKELIKYKGYQVAPAELEELLIAHPDISEAAVVPLKDEDAGEVPVAFVVRSSGSKISEDEIKQYISQQVVFYKRINKVYFTEAIPKAVSGKILRKELTARLMKD* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1499 543 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Psa2g1499 543 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 7 540 - -
Psa2g1499 543 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 540 - -
Psa2g1499 543 SUPERFAMILY Acetyl-CoA synthetase-like 10 541 - -
Psa2g1499 543 Gene3D - 441 542 IPR045851 -
Psa2g1499 543 Gene3D - 4 440 IPR042099 -
Psa2g1499 543 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Psa2g1499 543 CDD 4CL 22 536 - -
Psa2g1499 543 Pfam AMP-binding enzyme 35 446 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1499 Psa-Chr2 114286602 114288906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1499 4 508 Monolignol Biosynthesis Gene Families AT1G51680 62.622 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1499 K01904 - gmx:548034 829.706