Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1494 ATGACTCTACCAAGGCTAGGAATAGGGGATGATGAAGGTGAAAGCAATGTTACTTTGTTGGTTTCTTCATCAACCTCAATGGAAAAAAGTGTGTGTTTGAATTTGAATGGTTCAAAGCCAAAAGAGTTTAACTACATGGGATTATCATGTGATTCTTCATCATCAGTGGATAGTTTGGTTACAAAGATTCAATCTTTTGAAGATGGGGCCAAAAGAAACTTGAACCTTAAAGCTACTGAGCTTAGATTGGGACTTCCAGGCTCAGTGTCTCCTGAAAGGGATTCTTCGGATCTTTGTTTGAGAAGTTTTGATGAAAAGCCTCTTTTTCCTTTGCACCCTCAAAAAGATGAATCAAAGCATGCTGTTTTAGGTAACAAAAGAGGGTTTTCTGATGCCATGAATGTTTTCTCAGAGGGGAAAATGAAGCCTGGCTCCAATATGCTTGAGAATGTTGCGGCGCTGCAAGGGAAAGGCACTGAAATAGCAACAGTTCAGGTTGGTCTTGAGAGGCCGAACGGTGTCGGTGAAAGCAGACCAAATCTTAATGGTTCTGCAAATAATGGAAATAGCATTGCTCCAGCTACCAAGGCACAGGTTGTTGGTTGGCCTCCAATAAGATCATTTCGCAAAAATTCCTTGACAACTGCTTCAAAGAACACCGAAGAGGCTGATGGAAAACTGGGATTAGGAGGCGCCGTGTTTGTGAAGGTTAGCATGGATGGTGCTCCTTATTTGAGAAAAGTAGATCTGAAGAACTACACTGCATATTCAGAACTCTCTTCATCTCTTGAGAAGATGTTCAGCTGTTTCACCATAGGACAATGTGAATCTCATGGAAATCAGATGCTGAATGAAACAAAGCTGAGAGATCTGCTTCATGGGTCAGAATATGTTATTACTTACGAGGATAAAGACGGTGACTGGATGCTTGTCGGTGATGTTCCTTGGGAGATGTTTATCGATACATGCAGGAGGCTAAGGATCATGAAAAGCTCCGAAGCGATTGGTCTAGCACCTAGAGCAGTTGAAAAAAGTAAAAGCAGGAACTAG 1050 0.4181 MTLPRLGIGDDEGESNVTLLVSSSTSMEKSVCLNLNGSKPKEFNYMGLSCDSSSSVDSLVTKIQSFEDGAKRNLNLKATELRLGLPGSVSPERDSSDLCLRSFDEKPLFPLHPQKDESKHAVLGNKRGFSDAMNVFSEGKMKPGSNMLENVAALQGKGTEIATVQVGLERPNGVGESRPNLNGSANNGNSIAPATKAQVVGWPPIRSFRKNSLTTASKNTEEADGKLGLGGAVFVKVSMDGAPYLRKVDLKNYTAYSELSSSLEKMFSCFTIGQCESHGNQMLNETKLRDLLHGSEYVITYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSEAIGLAPRAVEKSKSRN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1494 349 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 27 343 IPR003311 GO:0005634|GO:0006355
Psa2g1494 349 PANTHER AUXIN-INDUCED PROTEIN 27 343 - -
Psa2g1494 349 MobiDBLite consensus disorder prediction 170 190 - -
Psa2g1494 349 Pfam AUX/IAA family 79 340 IPR033389 -
Psa2g1494 349 ProSiteProfiles PB1 domain profile. 232 331 IPR000270 GO:0005515
Psa2g1494 349 SUPERFAMILY CAD & PB1 domains 227 330 - -
Psa2g1494 349 Gene3D - 230 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1494 Psa-Chr2 114094506 114098838 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1494 236 339 B3 DNA Binding Superfamily AT4G23980 31.731 1.31e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Psa2g1494 AUX_IAA 5e-86 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1494 K14484 - gmx:100818881 457.988