Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa2g1483 | ATGGCCGATCAGATCAAGAGGGAGATTTCTATTATGAAACTAGTTAGACATCCATATGTTGTTCGCCTCCATGAGGTTCTGGCCAACCGTACTAAGATTTATATCATATTGGAGTTCATCACAGGTGGTGAATTGTTTGATAAAATTGTACACCACGGGCGTCTCAGTGAAGCTGAATCTAGGAGATACTTCCAACAGCTTATTGATGGTGTAGATTATTGCCATAGTAAGGGAGTTTATCATAGAGATTTAAAGCCTGAAAACCTTTTACTTGATTCACTAGGAAACATGAAGATTTCAGATTTTGGTTTGAGTGCTTTGCCAGAACAGATTGACAAAGCAGAGTTTTCATGCCCTGCTTGGTTTCCTGTGGGAGCGAAATCTTTGATACAGCGAATCTTGGACCCAAACCCTGAGAATCGTATTACCATTGAGCAGATTAGAAATGACGAGTGGTTTCAAAAAAGCTATGTTCCTGTCCATCTCCTCGAGTATGAAGATGTAAATCTGGATGACATAAATGCTGCATTTGACAGTGTTGAGGATCAGAGGGATAATCGGCAATGTGAGGTTGAGGACACGGGTCCTCTAGTTCTTAATGCGTTCGACATGATAATGTTATCTCAAGGCTTAAACCTTGCATCAATCTTTGATCGGGGACAGGACACTATGAAGTACCAAACACGCTTCGTCACTCAAAAGCCAGTGAAAGTGGTTTTAACAAGTATGGAAGTTGTGGCACAGTCAATGGGATTCAAGACGCATATTCGTAACTACAAGATGAGAATAGAGGGTATTTCAGCAAATAAGAAATCCCATTTTTCAGTTATATTGGAAGTTTTTGAAGTTGCTCCAACATTTTTCATGGTGGATATTCAGAAAGCAGCTGGAGATGCCAGTGAGTATCTCAAGTTTTACAAGAATTTTTCTAGCAATCTTGAAGATATCATCTGGAAATCGCCTCATGAAACAAGCAAATTGAAGACCTCCAAGAATAGAAGCAAGAGACACTAG | 1014 | 0.3984 | MADQIKREISIMKLVRHPYVVRLHEVLANRTKIYIILEFITGGELFDKIVHHGRLSEAESRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSLGNMKISDFGLSALPEQIDKAEFSCPAWFPVGAKSLIQRILDPNPENRITIEQIRNDEWFQKSYVPVHLLEYEDVNLDDINAAFDSVEDQRDNRQCEVEDTGPLVLNAFDMIMLSQGLNLASIFDRGQDTMKYQTRFVTQKPVKVVLTSMEVVAQSMGFKTHIRNYKMRIEGISANKKSHFSVILEVFEVAPTFFMVDIQKAAGDASEYLKFYKNFSSNLEDIIWKSPHETSKLKTSKNRSKRH* | 338 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa2g1483 | 337 | SMART | serkin_6 | 3 | 153 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Psa2g1483 | 337 | ProSiteProfiles | Protein kinase domain profile. | 1 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Psa2g1483 | 337 | ProSiteProfiles | NAF domain profile. | 194 | 218 | IPR018451 | GO:0007165 | |
| Psa2g1483 | 337 | PANTHER | - | 1 | 110 | - | - | |
| Psa2g1483 | 337 | PANTHER | - | 110 | 334 | - | - | |
| Psa2g1483 | 337 | Gene3D | Kinase associated domain 1, KA1 | 195 | 319 | - | - | |
| Psa2g1483 | 337 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 109 | - | - | |
| Psa2g1483 | 337 | Gene3D | Transferase(Phosphotransferase) domain 1 | 110 | 194 | - | - | |
| Psa2g1483 | 337 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 163 | IPR011009 | - | |
| Psa2g1483 | 337 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 110 | 334 | - | - | |
| Psa2g1483 | 337 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 1 | 110 | - | - | |
| Psa2g1483 | 337 | Pfam | Protein kinase domain | 3 | 110 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Psa2g1483 | 337 | Pfam | NAF domain | 196 | 254 | IPR004041 | GO:0007165 | |
| Psa2g1483 | 337 | CDD | CIPK_C | 200 | 315 | - | - | |
| Psa2g1483 | 337 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 79 | 91 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa2g1483 | Psa-Chr2 | 112907797 | 112913705 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa2g1483 | 1 | 320 | CBL-interacting serine-threonine protein kinases | AT1G01140 | 38.817 | 4.16e-92 | 280 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | CAMK_CAMKL-CHK1 | Psa2g1483 | Pkinase | 1.7e-34 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa2g1483 | - | - | twl:120009586 | 493.426 |