Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1481 ATGGAGAATCATTACTCTTCGCATCCCAATTCGCGTGATTCCTCACCTACCTCTCGCGAATTGCTCGAAATCGATCACCGTTCATCGTTCGATGAACCACCTCTTTCCAACACCAAGAGAGTCAAACTCATCTGTAGCTTCGGTGGAAAAATTCAACCCAGGCCTCACGACGGTCACTTGTCGTACATCGGAGGTGACACCAAAATCCTCGCCGTCGATCGTAACGTCAAGTTATCATACCTCATTGGTAAGCTCACTGCAATGGCGGATTCTGATGTCTGTTTCAAATATCAACTCCCTGGTGAAGATCTCGATGCTTTGATCTCGGTATGCAATGAAGACGATCTCGATTATATGATGATCGAGTACGATCGTATGTGTCGCGCTTCACCTAAGCCTGCAAGGTTGAGGCTCTTCCTCTTTCCTTCCCCTGTCAAGAACCACAGCAGCAATGCATCTTTCGATTCTACCAATTCCGCTATGAATCTCGCCGCTGCGGAGGATTCCAAATCGGAAGGTAAGTGGTTCGTCGACGCTCTCAATTCCGTTTCCGTTCCGGCGATGGAAGATTCTTTTCCACCTCCTCCGCCGCCAGAGATGAATCCTGATTATCTGTTTGGATTGGATAAACCGTACTCCCCGTCTCCCGAGGCCAAACAGACGGAAGTCCCGGAGACTGTTCCGGATTATGCAGCGAAGGATACAGAATGTGAGTCCGAGACGGTTAGAGAAACCGAGATTCAGGAAATTAAGAGAATGCAGACTGTGAATGATCATCAGCAAATGAATTTTAACGGAGAAAGCGGCAGAGTTAACGGCTGTGTTGTTTACTCTCAGGAAAACACGGAAACCGAGATGCCGTTAGTTACTACTCCACCATTTCAAGCTGTGAATGATGAACAGAAAATAAATTCTGACGGAGAAAACAGCAGAGTTAGCGGCGGTGTTGACAGTTACTCTCAGGAAAACACGGAAACTGAGATGCCGTTAGTTACTACTCCACCAGCTGAAGCAGTGAATGATGAACAGCAAATGAATCTTGACGGAGAAAACGGCGGAGTTAACGATTATGCTGACTGTTACACTCAGGAAAACACGGAAACCGAGATGCCGTTAGTTACAGCTGTACCTGTTCAAGCTCCAGCTCCGGTTCATTCCGGATTGTACCAAGCAGTGAGGCCAGTCATTGGACCAACCGGTCAACCGGTTTATTTTGCATATACACAGATTGGGAACGAGTTTGGTTACAATGGATCAGGGGTGCCTGGCATGGTTTCCGAGCGTGGCTATTCTAATGGTTCGTACGGGCAAGCTTTTCAATCTCAGGCGGCGGTTGCCGGTGTTGACAGCTGGAATTGA 1359 0.4783 MENHYSSHPNSRDSSPTSRELLEIDHRSSFDEPPLSNTKRVKLICSFGGKIQPRPHDGHLSYIGGDTKILAVDRNVKLSYLIGKLTAMADSDVCFKYQLPGEDLDALISVCNEDDLDYMMIEYDRMCRASPKPARLRLFLFPSPVKNHSSNASFDSTNSAMNLAAAEDSKSEGKWFVDALNSVSVPAMEDSFPPPPPPEMNPDYLFGLDKPYSPSPEAKQTEVPETVPDYAAKDTECESETVRETEIQEIKRMQTVNDHQQMNFNGESGRVNGCVVYSQENTETEMPLVTTPPFQAVNDEQKINSDGENSRVSGGVDSYSQENTETEMPLVTTPPAEAVNDEQQMNLDGENGGVNDYADCYTQENTETEMPLVTAVPVQAPAPVHSGLYQAVRPVIGPTGQPVYFAYTQIGNEFGYNGSGVPGMVSERGYSNGSYGQAFQSQAAVAGVDSWN* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1481 452 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 427 - -
Psa2g1481 452 Pfam PB1 domain 57 142 IPR000270 GO:0005515
Psa2g1481 452 CDD PB1_UP2 44 141 - -
Psa2g1481 452 Gene3D - 61 142 - -
Psa2g1481 452 SMART PB1_new 55 143 IPR000270 GO:0005515
Psa2g1481 452 PANTHER OS05G0427100 PROTEIN-RELATED 1 427 - -
Psa2g1481 452 SUPERFAMILY CAD & PB1 domains 56 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1481 Psa-Chr2 112785116 112786612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1481 31 183 MAP Kinase Kinase Kinase AT5G57610 39.869 1.39e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1481 - - cam:101512371 422.55