Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1470 ATGCCGAGCCACGAAATAAATCAACACCGGTCCAGAACCCGACCGTCCACGTCATCAAGCCGTCCACAACAACCGGTTCAAGCCCGAATCCCCTTACGGAAGTTACTCCGAGTAGCATCAGTAGCAAGCGGAATTCAATTCGGTTGGGCTTTACAGCTTTCACTATTAACACCCTACGTTCAACAACTCGGCATTCCTCATAAATGGGCGAGTATCATCTGGCTCTGCGGCCCGGTTTCCGGTTTATTCGTCCAGCCTTTGGTTGGACATTTAAGCGACCGGTGCGCCAGCCGCTTCGGTCGCCGTAGACCGTTTATTCTAGTCGGCGCGACTTCGATCATCGTCGCGGTTGTTATAATCGCTTACGCCGCGGATATCGGTTGGTTGATTGGGGATGATGTTAGCCAGAGTTATCGTCCTTATGCGATTGGAGTTTTCGTTTTCGGCTTTTGGATTCTTGATGTTGCTAATAATGTTACGCAAGGTCCTTGTAGAGCTTTACTCGCGGATCTTACCAGAAATGATGCTCGAAGGACACGTGTTGCAAATGCTTATTTCTCCCTGTGTATGGCCGTTGGTAACATTCTTGGCTATGCAACTGGGTCATACAGTGGCTGGTACAAGATTTTTACATTCACAATTACCCCTGCTTGCTCTATCAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTCGACATTGCTTTCATTGCGGTAACGACATATCTCAGCATTGTGTCAGCTAATGAAGTGCCTCTAAGTTCAAGGGGGGAAGCACATGCTGGAGAAGGGGCTGGAGAGTCAGGTGGTGCGGAAGAAGCTTTCATGTGGGAATTGTTTGGGACATTCAAATATTTTTCAATGCCTATCTGGATAGTACTGTCTGTAACTGCTCTAACATGGACTGGGTGGTTCCCGTTTACTCTATTTGATACTGATTGGATGGGTCGGGAAATTTACGGTGGTGATCCAAATGGAGGCCTTGTTTATGATTCTGGAGTTAGAATGGGAGCACTTGGTTTGTTGCTTAATTCAGTTGTTCTTGGAATAACATCATTGCTCATGGAAAGACTATGCAGGAAGCGAGGGGCTGGTTTTGTGTGGGGACTCTCAAATATCTCTATGACTATTTGCTTTATTTCAATGCTAGTATTAACCTATGCGGCAAAGAGTATTGGCTACGTAGAAAAAGGTCTACCACCACCAACAGGCATTGTGATCGCAGCGTTAGCAATATTTACCATTCTTGGGTTTCCACTGGCAATCACTTACAGTGTTCCATATGCCTTAATTTCCACACATATCGAACCACTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTGAATCTGGCAATAGTGGTCCCGCAGATCATAGTGTCCTTGGGAAGTGGACCATGGGATCAGTTATTCGGTGGAGGAAACTCTCCAGCCTTTGTTGTGGCAGCGGTTGCAGCCCTTTTTAGCGGACTCATAGCTTTGTTAGCTATTCCCCGAACTGGTACACAAAAGCCTCGAATCCGTGTATGA 1527 0.4669 MPSHEINQHRSRTRPSTSSSRPQQPVQARIPLRKLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHKWASIIWLCGPVSGLFVQPLVGHLSDRCASRFGRRRPFILVGATSIIVAVVIIAYAADIGWLIGDDVSQSYRPYAIGVFVFGFWILDVANNVTQGPCRALLADLTRNDARRTRVANAYFSLCMAVGNILGYATGSYSGWYKIFTFTITPACSISCANLKSAFFLDIAFIAVTTYLSIVSANEVPLSSRGEAHAGEGAGESGGAEEAFMWELFGTFKYFSMPIWIVLSVTALTWTGWFPFTLFDTDWMGREIYGGDPNGGLVYDSGVRMGALGLLLNSVVLGITSLLMERLCRKRGAGFVWGLSNISMTICFISMLVLTYAAKSIGYVEKGLPPPTGIVIAALAIFTILGFPLAITYSVPYALISTHIEPLGLGQGLSMGVLNLAIVVPQIIVSLGSGPWDQLFGGGNSPAFVVAAVAALFSGLIALLAIPRTGTQKPRIRV* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1470 508 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 7 506 - -
Psa2g1470 508 MobiDBLite consensus disorder prediction 1 26 - -
Psa2g1470 508 CDD MFS_SLC45_SUC 35 494 - -
Psa2g1470 508 PANTHER SUGAR TRANSPORTER 7 506 - -
Psa2g1470 508 SUPERFAMILY MFS general substrate transporter 35 500 IPR036259 -
Psa2g1470 508 MobiDBLite consensus disorder prediction 12 26 - -
Psa2g1470 508 Pfam MFS/sugar transport protein 50 198 - -
Psa2g1470 508 Gene3D MFS general substrate transporter like domains 32 495 IPR036259 -
Psa2g1470 508 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 499 IPR005989 GO:0005887|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1470 Psa-Chr2 110563403 110575519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1470 4 504 Sucrose Transporter Gene Family AT1G09960 67.992 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1470 K15378 - gmx:100820483 801.201