Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1469 ATGACAAAAGGGCTCATTGTTTTATTGCCTAGTAAATATTCCATTCATCACGCGGATAATACAGACGGAAAGATGTTGATGCTTGGCATACAAGGTGATCGATCACACGCTCCAGCGACGTCCATGTTTTTCAATCAACAAGGAGATCTTCTTTTAGCCGGTTATGGCTCTTGTGTCCAATCCAATTCTCCATACATGGACAACGCCTTTGCTAAATCTATTCCCGAGATCCTTGACTTCTTTCGAGTGGACCCAACAAAGGGTTTATCCGACACTCAGGTTGTACAACATGGCAGACTTTATGGTACAAACGTGCTGCATGAAGATCAAAGAGCTCCGTTTTGGAAATTGGTTTTGAAACAGTTTGATGATTTGCTTGTGAAGATACTAATTGCAGCTGCTCTTATATCATTTATTCTGGCATTAATTAATGGTGAAACAGGATTGATGGCGTTTCTGGAACCTTCTGTTATTCTGATGATATTGGCTGCAAAAGCAGCTGTGGGAATGATCACAGAAACAAATGCCGAAAAAGTTCTTGTGCGTGTAGCATTTAGTGAAGCCCAACAAAAGTCAGACTATGTGCTAATCAGAGTTGGTGCCCATGTATACCCTCGAAATCCAGTTCTTCATATTGGAAGTCCTCTTAACTTGAGCATAAAAGGATTGAATGATAAAGTTTCTGGAAAATGGTCTACAACTAATGGAAGTGTAATATCAGTGGATATGTTGTCTGGAGTGGCCAAGGCTGTTGGAGAAGGTTCAGCCCAAGTATATTTCTATTATGCAAGATCGAAGTTGCAAACGACAATTACAGTGTTGAAAGGCCACAGTATTTCTGTGGATGCTCCAAAAGGAATGTTGACTATTGTTCCATACCCTACAAAAGGATACAACTTCTCTGTGAAGTGCAGTACCACATATGGTGAAAGCCTTGATCCACCAGGACGAAACAAGATAATTTCATTTGACTGTAGAGTAGATCCTCCATATGTCAGGTACGTCAAGCCATGGCTGGATATAGGGAACTTAGAAGATGCTGGCAGGATGTTAAGTTGTGATTTAACTTTTGGAATGGAGAGTCTCAATAATGAAGAGAAGTTCTGCTGGTTTTCTTCTTCGCATGGCGCTGAAGGATACTCCAAGGAAAATATTGAAGTTCTTCCGATCAATGGTTCGAATAGAAAGTCATCCCACGATGATAAGAAGATAAGATCTCAAATGGATGTGGATGTCAACGGTGCCGCTGCTTCATTATCAATGTTCAGTGAATCAGACACAAAATCCGGTCATAAAGATGCATTGGTGCCCGAAGAAAAGAAGAAGCTTCCAAAGTCGCCATCAGCAGGAAAGCGAAAAATTGGAAATTTTGTTCATCTTTATACTCCTCATGAGCAGTATGGAGATATAAATCAGCAACTTGGAGCCTCTTCTAGTGGAGTTACTTCTCTTGATAGTAATCAGAAGCAAAAGCAGAACATAGATTATGATTCTTTAGGCTGCATACGGCACTACCGAGCTCCACATTATCCGGCCGCCAATATCACTGCCATAGTGGTAACAGAATCAGGATGGCCTTCAAAAGGTGCCTCGGACGAGTCCGACACAACAATAGACAACGCCAATAATTACAACAGCAATTATGGTCAAGATTCAGCCGCAGTTGATGCTTTTATACAACGTTGTAATTTGGATCCTGATTCACTCATCACCGTGAGTCCAAGAGAAATGGATGATTGCAATGGACATGGCTCTAGAATGCCTGTAAAATTAAGAGCTTTTGTGGAATTGACTATGGATGTAGCTTCTGCTTCCTCTCGGCGGTATTTCTTCGAGGTTATGAGTTTTTTTGCAACAACTGAACATGAGAAAGAAAGACTTAAGGATTTTGCTTCGCCACAAGGAAGAAGTCAGGGTGCTCGCAGTGTACAACAAGTTAGATCTACTTCGCCTCCATCCAGTGAATCGGACTCTGTAAAATATGCTTGTGTGGTTGATGATTTTCGAAATCATGTTGCACACTCACCGCCTCTTGATAGTGATCAGTTTTATCGGGCTGGTATTGCGGTTGTCAATTTCATTTCTGATTTAGTTCATAGTAAGCTTCCTTTATCAGATGGGATGGGGATACTAAGCTACTATAAAAGGATGAATAAAAAAATTGAAAGCCTTTTGAGCAACTTAGAAGTTAGATATCAGCAAGTACCTATGCCTACTCCAGTTCCTTCTTTTAATAATGGTGGGGGGACTTTAGACAAACTATGCCAACTCATGCTAGAAGATGAACCTATTGTCTATCCAACAACAGATAAAAGTTCTTCAAAAATGGGATTTGATAATTTGGACTCAGATGAGTCAAGTACAGAAGATGAGTTCTCTTTGCTAGAAGATATGTATGGTTCGTCTGAAACTTCATCCTTAAACAGCACTGAGGAGCAATTGGAGTCCGATCAGCTTAGTCTTTGGCCTTACCCAATAGCAGGGCAATAA 2490 0.4072 MTKGLIVLLPSKYSIHHADNTDGKMLMLGIQGDRSHAPATSMFFNQQGDLLLAGYGSCVQSNSPYMDNAFAKSIPEILDFFRVDPTKGLSDTQVVQHGRLYGTNVLHEDQRAPFWKLVLKQFDDLLVKILIAAALISFILALINGETGLMAFLEPSVILMILAAKAAVGMITETNAEKVLVRVAFSEAQQKSDYVLIRVGAHVYPRNPVLHIGSPLNLSIKGLNDKVSGKWSTTNGSVISVDMLSGVAKAVGEGSAQVYFYYARSKLQTTITVLKGHSISVDAPKGMLTIVPYPTKGYNFSVKCSTTYGESLDPPGRNKIISFDCRVDPPYVRYVKPWLDIGNLEDAGRMLSCDLTFGMESLNNEEKFCWFSSSHGAEGYSKENIEVLPINGSNRKSSHDDKKIRSQMDVDVNGAAASLSMFSESDTKSGHKDALVPEEKKKLPKSPSAGKRKIGNFVHLYTPHEQYGDINQQLGASSSGVTSLDSNQKQKQNIDYDSLGCIRHYRAPHYPAANITAIVVTESGWPSKGASDESDTTIDNANNYNSNYGQDSAAVDAFIQRCNLDPDSLITVSPREMDDCNGHGSRMPVKLRAFVELTMDVASASSRRYFFEVMSFFATTEHEKERLKDFASPQGRSQGARSVQQVRSTSPPSSESDSVKYACVVDDFRNHVAHSPPLDSDQFYRAGIAVVNFISDLVHSKLPLSDGMGILSYYKRMNKKIESLLSNLEVRYQQVPMPTPVPSFNNGGGTLDKLCQLMLEDEPIVYPTTDKSSSKMGFDNLDSDESSTEDEFSLLEDMYGSSETSSLNSTEEQLESDQLSLWPYPIAGQ* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1469 829 Gene3D - 550 651 IPR023173 GO:0016491
Psa2g1469 829 SUPERFAMILY Calcium ATPase, transmembrane domain M 68 189 IPR023298 -
Psa2g1469 829 Gene3D - 87 188 - -
Psa2g1469 829 Pfam Cation transporter/ATPase, N-terminus 72 137 IPR004014 -
Psa2g1469 829 MobiDBLite consensus disorder prediction 421 449 - -
Psa2g1469 829 MobiDBLite consensus disorder prediction 426 445 - -
Psa2g1469 829 MobiDBLite consensus disorder prediction 627 657 - -
Psa2g1469 829 PANTHER PROTEIN LNK1 337 379 IPR039928 GO:0006355|GO:0007623
Psa2g1469 829 PANTHER PROTEIN LNK1 381 547 IPR039928 GO:0006355|GO:0007623
Psa2g1469 829 PANTHER SIALOPHOSPHOPROTEIN-LIKE PROTEIN, PUTATIVE-RELATED 381 547 - -
Psa2g1469 829 PANTHER SIALOPHOSPHOPROTEIN-LIKE PROTEIN, PUTATIVE-RELATED 337 379 - -
Psa2g1469 829 MobiDBLite consensus disorder prediction 635 657 - -
Psa2g1469 829 SUPERFAMILY Riboflavin synthase domain-like 551 637 IPR017938 -
Psa2g1469 829 Gene3D - 120 176 - -
Psa2g1469 829 MobiDBLite consensus disorder prediction 798 817 - -
Psa2g1469 829 MobiDBLite consensus disorder prediction 769 829 - -
Psa2g1469 829 SMART bid_2 197 272 IPR003343 -
Psa2g1469 829 SMART Cation_ATPase_N_a_2 68 142 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1469 Psa-Chr2 110228362 110233308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1469 66 180 Primary Pumps ATPases(2) AT1G10130 76.522 4.63e-49 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1469 K14314 - gmx:100778001 236.884