Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1461 ATGGAAGAGGTGATGAGTTTTATGATGCATGCTTTTGAATTGGCAAAAAATCTTGATCTAGAATTACCCAACATGGTCAACAACACTGAGATTCTATATTCATCCATTCATGAGGTAGAAAAAGCTTATAGTGATGCGAAAGAAAGAGTAATGATGATGTTGTCGTCGTCATCGTCATCACAATATAACACAACAACAACAAAAGGTTCTGGTTCCTTTGCTCAAATTCTGTCTCATGATGTTTTCATGCAGAAAAAGCAGCATGATCAAATCATGCATGCACATTCAATGGACCCGTTGCTTCTAATTCAACACCCTTTTGATGTGAGTGTTTTTCTTGAGAATGAGATGATAAGTGGTGGCGATGATGCTCAAATGTTGAGATCAAAAGGGAAACAATTGGTTGATGTTCAAGGAAAAGAAACACCATCATCATCATCACGACCAAAACAAAGGAAAAATGATTTGGAGAAGAGAATAGAGATGTTTCCTGCACCTCAAATTGGAAACACTGAGATGCCACCAGAAGATGGCTTCATTTGGAGAAAATATGGCCAGAAAGAGATTCTTGGCCGGAAGTACCCAAGAAGTTACTATAGGTGCACACACCAAAAGCTATACCTTTGCCCAGCCAAGAAGCAAGTACAAAGGCTTGATAACAATCCAAACATAGTTGAAGTAACATATAGAGGTGAACACATTTGTCACAAATCCTTAACAGCACCATCATCATATCCACCACTACCAAACCTACTTGCAAACATTAGTGCTTCTCAAACTCAAACTAACATTTCCTCCGAGATGTGGCGGCCTTCGATGAATCTCGACCTCCGGGACGGAGATGGTAGCGGCGGTGGAGCCTCTAATCTAAGATTCGGTGTTGAATACGCGGTGGCTGAGATGGCGGATGCAATGTTCAATTCAGGCAGTAGTAGTGGAAATAGTATGGAGTTACTCTTTCAACCAAGTGAAGATAAATGGGAGCATGATGAAAAAGAAGATTGA 1005 0.404 MEEVMSFMMHAFELAKNLDLELPNMVNNTEILYSSIHEVEKAYSDAKERVMMMLSSSSSSQYNTTTTKGSGSFAQILSHDVFMQKKQHDQIMHAHSMDPLLLIQHPFDVSVFLENEMISGGDDAQMLRSKGKQLVDVQGKETPSSSSRPKQRKNDLEKRIEMFPAPQIGNTEMPPEDGFIWRKYGQKEILGRKYPRSYYRCTHQKLYLCPAKKQVQRLDNNPNIVEVTYRGEHICHKSLTAPSSYPPLPNLLANISASQTQTNISSEMWRPSMNLDLRDGDGSGGGASNLRFGVEYAVAEMADAMFNSGSSSGNSMELLFQPSEDKWEHDEKED* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1461 334 Gene3D WRKY domain 165 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g1461 334 SUPERFAMILY WRKY DNA-binding domain 172 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g1461 334 MobiDBLite consensus disorder prediction 128 155 - -
Psa2g1461 334 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 255 IPR044810 GO:0003700
Psa2g1461 334 ProSiteProfiles WRKY domain profile. 176 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g1461 334 Pfam WRKY DNA -binding domain 176 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g1461 334 SMART WRKY_cls 175 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g1461 334 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1461 Psa-Chr2 109744576 109746616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1461 1 325 WRKY Transcription Factor Family AT2G40740 34.848 4.07e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa2g1461 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1461 - - mtr:MTR_5g067680 441.81