Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1459 ATGCAATATAAAACATTATATCATTCTAATAATCTTATACAGAAAATGAATAACAACATTCCTGAAAGTGTGAGAAAGAGAGTGATAATCAAAGAGCTTGTAAAGGGTCAAGAAGCTGCAACCAAACTCAAATTTCTTCTTCAGAATGAGCAAAATCCCTTTGGTGATGGCTCTCTTTTATCGTACAAACTTGCTGCAAATGTGCTGAGATCATTCACAGAAGCTCTTTCTATTGTCTCTCAACCAGGTTGTGAGGATTTTCTGAATCTGCTAAATCCCGGCGAAAACGGATCGCCGGTGCTGTCAGACACCGGGATTGATCCACCGGCCGGAGATTCTGCTGGTAGTGTTGTAAAGAAGAGTTTAAGAGGTTCCTACAAAAGAAGGAAGTGTGCAGATACATGGTCCATAGTTTCCCAAACCACTGTTGATAATCATTCATGGAAAAAGTATGGACAGAAGGGAATCATGAATTCTGAATACCCCAGGAGTTATTTCAGGTGCACATTTAAGCATGATCACGGCTGCTTAGCAATCAAACAGGTGCAAAAAACACAAGACAAACCTGATGTGTATCAAATTACTTACATTGGCATTCATACATGCAACAATACCACTAATGTTACAGATAAACAGAAGCAAGAATTAGTGGTGTCTGATGATGTTGCTGATGCTGTGTTAGTGTTTGTTTCAAAGTCCAGCAATGGAGTCCTTAATTAG 720 0.3917 MQYKTLYHSNNLIQKMNNNIPESVRKRVIIKELVKGQEAATKLKFLLQNEQNPFGDGSLLSYKLAANVLRSFTEALSIVSQPGCEDFLNLLNPGENGSPVLSDTGIDPPAGDSAGSVVKKSLRGSYKRRKCADTWSIVSQTTVDNHSWKKYGQKGIMNSEYPRSYFRCTFKHDHGCLAIKQVQKTQDKPDVYQITYIGIHTCNNTTNVTDKQKQELVVSDDVADAVLVFVSKSSNGVLN* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1459 239 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 213 IPR044810 GO:0003700
Psa2g1459 239 ProSiteProfiles WRKY domain profile. 144 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g1459 239 SUPERFAMILY WRKY DNA-binding domain 140 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g1459 239 SMART WRKY_cls 142 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g1459 239 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 22 213 - -
Psa2g1459 239 Gene3D WRKY domain 129 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g1459 239 Pfam WRKY DNA -binding domain 144 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1459 Psa-Chr2 109642093 109646998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1459 24 203 WRKY Transcription Factor Family AT3G56400 35.079 2.32e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa2g1459 WRKY 1.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1459 - - mtr:MTR_5g067700 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1459 2 109642093 109646998 Psa5g1602 5 125961420 125963591 PCT