Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1456 ATGGAACCACATCCGAGTGCATTCTCCTCTATGCTTCGAAGCAGGAGCATTCATTATTCCTGTCTTCCTCAACCATTGCTCGCTCTTAGTACAAAAATCCTCTTTTCTTCGCCGTCAACCTCTTCTTCAGCAACCACTTCATCTGAAACAAGAACTCGTTACCCTTCCATAAACCCTAAATCCTCATTCAATAGCCTTTCTCTATTCTCCAACCATCACTCTCTTCAAACCATGACGATTTCCAAGTGTTTCTCTCACTTGGATGAATCTGATTCTGTAGTAGACTCTCTTGTTGTGGTTTCGTTCTACAAGTTCGCGGATTTCCCTGATCATGCTGTGTTGCGTGTTCCTTTGAAGCAGCTTTGTCAAGAATTGCGTGTTTCAGGTGGTATCATTCTTGCGCCGGAAGGAATTAATGGAAGCCTATGTGGCACGCGGCAGTCGGTTGAGAAAGTTCTTGCATTTATTCAGAGTGATGAGCGCCTTAAGGGACTAAGACGTATTGAATCGCCAGTCAGCCCCGAGGAGGAGGCCATACATCACGGTCAGAATGATGGACATAGTTCCAGTTCTCCTCTTGCTGCTGGGGAGGATGTGCCTTTCCGATGGGATCATGTGAGAGTCAAGTTGAAGAAAGAGGTAGCATTTACAAATGTCAAAAGACTGAACTACTTTGTTATATTAAATGTCACGAACAACTTATCGAGCTTAAGCCTTTTGATTTCGCAGATCGTCACTCTTGGGATGCCTACTATATCACCTATTGAAAGGGTTGGAAAATATGTTGGCCCAAAGGAATGGAATTCTCTTATTAGTGATCCTGATACAGTGGTAATTGATGTGCGAAATAACTACGAAACCAGAATAGGAAAGTTTAAAGGAGCTGTTGATCCCTGCACGACATCATTTCGTGAATTCCCATCTTGGGTGGAGGAACGTTTTGAGCTTATGAGAACAGATGCTGAGTATCCAAAAGTTGATGTAAACCATTCAGACCAAAGTGGTGAAAAGGAAACAGAGAGTACGAAACAACAGTTGCCGCGTATTGCAATGTATTGCACCGGGGGTATTCGATGTGAGAAAGCTTCAAGTCTACTTCTCAGCCAAGGTTTCAAAGAGGTTTATCACCTGGAAGGTGGAATTCTGAAATATCTTGAGGAGATTCCAGAGAAACAAAGTCTCTGGGAGGGAGAATGCTTTGTGTTTGACAAACGTGTCTCGGTCGAGCATGGTTTGGCACAAGGAAATTTCAAGCTCTGTTACGGTTGTAAGCAGCCTGTGAGTGATGCTGACATGGAATCTCCAGAATATGAATATGGAGTCTCTTGTCCTTACTGTTTTGCACAGAAGTCGGAAGAAGAGAAGGAGAGGGCTCGAGCTCGACAAAAACAATTTCAAAGATGGGGGATCATAGGTGGTCCAGATAAGGGCCGTCGGCCAAAACTGGAATCAGATGTTTCTAGCAGTAATCAAAGTCAACTTTCAAAATCTATTTAA 1497 0.4342 MEPHPSAFSSMLRSRSIHYSCLPQPLLALSTKILFSSPSTSSSATTSSETRTRYPSINPKSSFNSLSLFSNHHSLQTMTISKCFSHLDESDSVVDSLVVVSFYKFADFPDHAVLRVPLKQLCQELRVSGGIILAPEGINGSLCGTRQSVEKVLAFIQSDERLKGLRRIESPVSPEEEAIHHGQNDGHSSSSPLAAGEDVPFRWDHVRVKLKKEVAFTNVKRLNYFVILNVTNNLSSLSLLISQIVTLGMPTISPIERVGKYVGPKEWNSLISDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEERFELMRTDAEYPKVDVNHSDQSGEKETESTKQQLPRIAMYCTGGIRCEKASSLLLSQGFKEVYHLEGGILKYLEEIPEKQSLWEGECFVFDKRVSVEHGLAQGNFKLCYGCKQPVSDADMESPEYEYGVSCPYCFAQKSEEEKERARARQKQFQRWGIIGGPDKGRRPKLESDVSSSNQSQLSKSI* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1456 498 Hamap tRNA uridine(34) hydroxylase [trhO]. 95 430 IPR020936 -
Psa2g1456 498 Pfam Rhodanese-like domain 265 386 IPR001763 -
Psa2g1456 498 MobiDBLite consensus disorder prediction 173 192 - -
Psa2g1456 498 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 240 418 IPR036873 -
Psa2g1456 498 Gene3D - 84 215 - -
Psa2g1456 498 SMART rhod_4 262 390 IPR001763 -
Psa2g1456 498 CDD RHOD_YceA 259 386 - -
Psa2g1456 498 Pfam UPF0176 acylphosphatase like domain 98 214 IPR040503 -
Psa2g1456 498 MobiDBLite consensus disorder prediction 457 498 - -
Psa2g1456 498 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 96 488 IPR020936 -
Psa2g1456 498 MobiDBLite consensus disorder prediction 484 498 - -
Psa2g1456 498 Gene3D - 246 428 IPR036873 -
Psa2g1456 498 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 96 488 - -
Psa2g1456 498 ProSiteProfiles Rhodanese domain profile. 272 393 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1456 Psa-Chr2 108942544 108946394 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1456 79 485 Sulfurtransferasese or Rhodanese AT2G40760 69.157 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1456 - - mtr:MTR_5g067730 737.643