Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1423 ATGGCTTCCATAAGCTATTTCCTCCTCATATTCTCCTTCTTCTTCAATCTAGTTTCTTCATCTAGTGATGTTCCAATCAATGTAACCAAACACTTCTCCTTCAAAGATTTCACTTTCACCAACAACTCAAGATTAGTCCATGATTTAAAGCTTCTAGGAAGTGCAAAATTCTCAAATGAAAAAGGTTCACTTCAAATCCCAAATGAATCACAAGAAACAGGTATAAGACATCAAGCAGGTAGAGGTTTATATTCCTTCCCGATTCGTCTGTTAGATCCAATTACCAAAACTCCGGCTTCTTTTCGAACCACCTTTTCATTTCAGCTTAATAATTCAACTACTAGTGCTTCTGATTTAAGTGATAATGGTGGTGGTAGTGGACTCACCTTCATTATTGTACCTGATGAGTTTACCGTTGGAAGGCCGGGACCTTGGCTCGCTATGCTTAATGATGCCTGCGAGAGCGATTATAAAGCGGTTGCAGTTGAGTTTGATACACGGATGAATCCAGAATTTGGTGATCCGAATGATAATCATGTTGGTATCAATTTAGGTAGCATAGTATCTACTAAAGTCATCAATGTTTCTGATGTTGGTGTTTCACTTAAAGATGGTTTTGTTCACCATGCTTGGATTGATTATGACGGACCTCGAAGGATAATGGACGTTCGTCTTGGACTTCCGAACGATGAAGTTTATCCTAGCAGGCCTATCTTCTCGGAGTTTATGGATCTTTCACCTTTTCTGAACGAGTATATGTTTGTAGGATTCACGGCTTCGACAGGGAACCACACACAAATTCATAATATACTTTCTTGGAACTTTTCTTCGACTAGTCAAGCTTTTCTTCGCTACCCTTCATCTGAAACATGTCAAGGTAAGATCTTGCTGCAGAATACTACAGAAACAACAGAAGCTACCGAGAAGTCTAATAGGAATAAAACTCCGCGAAGCTTTTTGATTTTTGTGGGTTCTGTAGTACTGGCTTTAGCTGTTTTAATTGGTTTTTACTTTATCAGTAAGCATAGAAAAAGTGCTTCTAAATCAAAGACTTCAATAGAGGACGAGATTCATCGGCCAAGACCTCCGAACAAACCGCGCCGATTCAGTTTTTCTGCACTTTCCTCTGCTACTAGATCATTCAGTGAGATAGAGATACTTGGAAGTGATATTAGAGGAGTATACTACAGAGGAAAGCTTGGTACTAATGGAAGCCAAGTAGCTGTGAAAAGATTCTCAGCTCAGTTTCTTAATACACACGGATCGGACAAGAAGCGTTTGTTGAAAGAAATCAAAGTCATTAGCCATGTTCGTCACCCGAATTTACTTCCTATAAGAGGCTGGTGTCAAGACAACAACGAAATCATTGCAGTCTATGATTTTGTCCCCAACGGAAGCCTTGATAAATGGCTGTTCGGAGCAGGAGTTCTTCCGTGGACGCGACGGTTCAAAGTCGTCAAAGACGTAGCCGACGGATTGAATTTCTTGCACAGTAAGCAACTAGCTCACAAGAACATGAAATGCAGCAGTGTGTTTTTGGATGTTAGCTTCAGAGCTGTTTTGGGAGATTTCGGATTTGTTCTAATGGGAGCAGAATCAAAACAGTTTGAATCAATAGTGTGTAATAGTGCCGATGTATTCGAGTTCGGTGTGATTGTGTTGGAAGTGATAGGTGGAAGGCCAAGGGTGGAGGAAGTGGAGGAAGGAAGATCAGAAGAGAGGAACTTATTGGATTTCGCATGGAACTTGCATGAAACAAATGAGAAAGTGAAGCTTGTTGATAGACGAATGGGGTCGTTGATCAATTTGGAGCAGGCGATTCGAGTAATGGAAATTGGTTTACTTTGTACATTGAATGAGAACAAAGGAAGACCTTCTATGGAAGAAGTTGTGGAGCTTCTTCATAACATGGAGAAGCCTCTTCCTGAGTTACCAAGAACTAGACCTATCGCTTTGTTTCCTTATAATAGTGCCAACACTGGGCTTTGCAATAATTACTCTTGCACTTTGAAGCTGTGA 2019 0.4052 MASISYFLLIFSFFFNLVSSSSDVPINVTKHFSFKDFTFTNNSRLVHDLKLLGSAKFSNEKGSLQIPNESQETGIRHQAGRGLYSFPIRLLDPITKTPASFRTTFSFQLNNSTTSASDLSDNGGGSGLTFIIVPDEFTVGRPGPWLAMLNDACESDYKAVAVEFDTRMNPEFGDPNDNHVGINLGSIVSTKVINVSDVGVSLKDGFVHHAWIDYDGPRRIMDVRLGLPNDEVYPSRPIFSEFMDLSPFLNEYMFVGFTASTGNHTQIHNILSWNFSSTSQAFLRYPSSETCQGKILLQNTTETTEATEKSNRNKTPRSFLIFVGSVVLALAVLIGFYFISKHRKSASKSKTSIEDEIHRPRPPNKPRRFSFSALSSATRSFSEIEILGSDIRGVYYRGKLGTNGSQVAVKRFSAQFLNTHGSDKKRLLKEIKVISHVRHPNLLPIRGWCQDNNEIIAVYDFVPNGSLDKWLFGAGVLPWTRRFKVVKDVADGLNFLHSKQLAHKNMKCSSVFLDVSFRAVLGDFGFVLMGAESKQFESIVCNSADVFEFGVIVLEVIGGRPRVEEVEEGRSEERNLLDFAWNLHETNEKVKLVDRRMGSLINLEQAIRVMEIGLLCTLNENKGRPSMEEVVELLHNMEKPLPELPRTRPIALFPYNSANTGLCNNYSCTLKL* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1423 672 SUPERFAMILY Protein kinase-like (PK-like) 357 634 IPR011009 -
Psa2g1423 672 Pfam Protein kinase domain 382 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1423 672 ProSiteProfiles Protein kinase domain profile. 381 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1423 672 Gene3D Transferase(Phosphotransferase) domain 1 462 538 - -
Psa2g1423 672 MobiDBLite consensus disorder prediction 349 363 - -
Psa2g1423 672 CDD lectin_legume_LecRK_Arcelin_ConA 37 278 IPR001220 GO:0030246
Psa2g1423 672 MobiDBLite consensus disorder prediction 349 369 - -
Psa2g1423 672 ProSitePatterns Legume lectins beta-chain signature. 160 166 IPR019825 -
Psa2g1423 672 Gene3D Transferase(Phosphotransferase) domain 1 539 639 - -
Psa2g1423 672 Pfam Legume lectin domain 31 281 IPR001220 GO:0030246
Psa2g1423 672 Gene3D - 28 282 - -
Psa2g1423 672 Gene3D Phosphorylase Kinase; domain 1 351 461 - -
Psa2g1423 672 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 28 652 - -
Psa2g1423 672 PANTHER - 28 652 - -
Psa2g1423 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 279 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1423 Psa-Chr2 107318081 107320099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1423 3 653 Receptor kinase-like Gene Family AT5G55830 31.322 3.50e-96 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa2g1423 Pkinase 2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1423 - - gmx:100781464 1048.11