Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1414 ATGATAGACCATTTACGCAATTCTATGTCGGAGGATTTGGATGATCTTGCTATTTTAATCCTCGATGAAGCTGATCGTCTTTTGGAGCTTGGATTTAGTGCTGAAATTCAGGAACTTGTTCGTGTGTGTCCCCGAAAAAGGCAGACCATGCTTTTTTCAACAACCATGACCGAGGAGGTTAATGATCTTATTAAACTTTCCCTATCAAAACCACTGCGTCTTTCTGCTGATCCATCTGCAAAACGACCAGCATCCTTGACTGGGGAGGTGGTTAGAATAAGAAGAATGCGCGAAGTCAACCAGGAAGCAGTTCTTCTAGCAATGTGCACCAAAACTTTTACTTCTAAAGTGATCATTTTCAGTGGAACTAAGCAATCATGCATCAAGGGACTGGTTGCACGAGAATTGAGGGAGGGACCACCAAGCGGGGGTGAGGACAGAAAACCTCCAAACGTCTTCCGTTCAAACATTTCCCACTACTCTGAGGAAACACAGCAACACAGCTGA 507 0.4418 MIDHLRNSMSEDLDDLAILILDEADRLLELGFSAEIQELVRVCPRKRQTMLFSTTMTEEVNDLIKLSLSKPLRLSADPSAKRPASLTGEVVRIRRMREVNQEAVLLAMCTKTFTSKVIIFSGTKQSCIKGLVARELREGPPSGGEDRKPPNVFRSNISHYSEETQQHS* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1414 168 Pfam DEAD/DEAH box helicase 3 63 IPR011545 GO:0003676|GO:0005524
Psa2g1414 168 PANTHER RNA HELICASE 24 126 - -
Psa2g1414 168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 74 IPR027417 -
Psa2g1414 168 PANTHER BNAA01G17110D PROTEIN 24 126 - -
Psa2g1414 168 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 20 28 IPR000629 -
Psa2g1414 168 MobiDBLite consensus disorder prediction 138 168 - -
Psa2g1414 168 MobiDBLite consensus disorder prediction 154 168 - -
Psa2g1414 168 Gene3D - 1 81 IPR027417 -
Psa2g1414 168 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 74 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1414 Psa-Chr2 106573742 106575273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1414 19 120 Eukaryotic Initiation Factors Gene Family AT5G11170 29.126 1.98e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1414 K13181 - gmx:100791233 209.149