Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1395 ATGAAGAAATCACCAAGCAGCAATTTGCAATATCAATCTAGTCAAAGAAAAAAGAATCCAAATTTTCAAGATATTACAGAAACTGAATATTCCACAAAGAGAAACTCAGGACTGAAAAGTTTCATATCTATTGTCAAAAAACTTGCTTTGATTTTTAGTAGCAAAAGCAAAAAAACAGCTTCAAATGTTGTTGGAAGTGATGACAGAAAGAATACATCAAAAGCAAGATTGATGGTATCATCTTCAACTGATTTATCATCTGAAAGTGGCAACAAGAATTCATCAAAATGGAAATTTTCTTCTTCCTATGCATCATCTAGTACTACAAGTGGACAACTTGGAGTTGGGAATTTTACTTTTGATGAAATTTTTAAGTCAACTGCGAAATTCTCGCCAGATAATCAGATTGGTGAAGGTGGATTTGGAACTGTCTATAGAGGGAAGCTTAATGATGGAACTATTGTTGCGGTGAAGCGCGCCAAGAAGGAAGCTCTGCAGAGTCACTTATATGAGTTCAAGAATGAAATATACACTTTATCAAAAATTGAACACTTGAATCTTGTGAGGTTATATGGATATTTGGAGCATGGAGATGAGAAGCTTATTGTTGTTGAGTATGTTGCTAATGGAAATCTCAGAGAACATTTAGATGGCACTCGAGGCGATGGACTAGAAATCGGCGAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAATAACTTACCTTCATATGTACACAGGAAGACATCCTATTGAGCCTAAGAAACAAATCGACGAGAGAGTCACAATCAGATGGGCAATGAAGATGCTAAGGAAAGGGGAAGCAGTGTTTGCAATGGATCCAAGATTGAGAAGAAATCCAGCCTCCATCAAGGCAATGAAGAAGGTTTTCAAGCTAGCTTTTCAATGCCTTGCACCTTCCATACATTCAAGGCCGCCTATGAAGAATTGCGCCGAAGTTCTGTGGGGAATCCGTAAAAGTTTTAAAGACGAAATGACTCCTATTCCCGCCTTACCTTCTCATCAATCTGAAAATTTTCCTCAAAGAGAAAAGAATAAGCATATGGTATTTGGTATCGAAGATGATGACAGCTACAAATTTACCTCCGCGCCTAATCATATTCGTTCATGA 1134 0.3757 MKKSPSSNLQYQSSQRKKNPNFQDITETEYSTKRNSGLKSFISIVKKLALIFSSKSKKTASNVVGSDDRKNTSKARLMVSSSTDLSSESGNKNSSKWKFSSSYASSSTTSGQLGVGNFTFDEIFKSTAKFSPDNQIGEGGFGTVYRGKLNDGTIVAVKRAKKEALQSHLYEFKNEIYTLSKIEHLNLVRLYGYLEHGDEKLIVVEYVANGNLREHLDGTRGDGLEIGERLDIAIDVAHAITYLHMYTGRHPIEPKKQIDERVTIRWAMKMLRKGEAVFAMDPRLRRNPASIKAMKKVFKLAFQCLAPSIHSRPPMKNCAEVLWGIRKSFKDEMTPIPALPSHQSENFPQREKNKHMVFGIEDDDSYKFTSAPNHIRS* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1395 377 Gene3D Phosphorylase Kinase; domain 1 89 206 - -
Psa2g1395 377 Gene3D Transferase(Phosphotransferase) domain 1 245 337 - -
Psa2g1395 377 Pfam Protein tyrosine and serine/threonine kinase 133 245 IPR001245 GO:0004672|GO:0006468
Psa2g1395 377 ProSiteProfiles Protein kinase domain profile. 130 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g1395 377 ProSitePatterns Protein kinases ATP-binding region signature. 136 162 IPR017441 GO:0005524
Psa2g1395 377 SUPERFAMILY Protein kinase-like (PK-like) 105 325 IPR011009 -
Psa2g1395 377 PANTHER OS01G0253100 PROTEIN 245 356 IPR045271 GO:0004714|GO:0006468
Psa2g1395 377 PANTHER OS01G0253100 PROTEIN 2 245 IPR045271 GO:0004714|GO:0006468
Psa2g1395 377 MobiDBLite consensus disorder prediction 1 24 - -
Psa2g1395 377 PANTHER OS02G0821400 PROTEIN 2 245 - -
Psa2g1395 377 PANTHER OS02G0821400 PROTEIN 245 356 - -
Psa2g1395 377 MobiDBLite consensus disorder prediction 61 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1395 Psa-Chr2 104824245 104826976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1395 114 244 Receptor kinase-like Gene Family AT5G01950 41.985 1.77e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Psa2g1395 PK_Tyr_Ser-Thr 9.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1395 - - gmx:100788236 323.939