Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1367 ATGTTTGGCAATGAAAATATAAATACCAATGATCCTTTCATGGATAGATCCTTATATGGCCAAATGATTCATTACCCTAACCATCAAGAAAATAATGCAAGTGTTTTTCCTTACTCTTATGGTTCAAACTACGATGAGTTTATGTGGCCAAATACTCAAGAATCAAGCTTTGTTGTTGATCATGGGGTCTTACCAAATGAAGAGGCTTTAAAGTGGACTAACTTCAACCAAACCTCAACATTGTGCCTTAAGGATACTAATGGTTATGGCGAAAGCACGAAAATCGTGGGAAGGAACACTAAGAAAGAGAAAGACAATTCTATGGTTTTGATCAAAGGACAATGGACAGATGAAGAAGATAGGAAACTAATAAGGTTGGTGAAAGAAAATGGTGAAAGAAAATGGACTCAAATAGCTGAGAAGCTAGAAGGAAGAGTTGGCAAGCAGTGTAGAGAGCGATGGCATAATCATTTACGTCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAAGATATTAGTAGCTATGCATGAAAAGATTGGAAACAGATGGGCTGAGATAGCAAAGAGGATTCCAGGAAGAACTGAAAATGCCATAAAGAATCATTGGAATGCAACAAAAAGAAGACAAAACTCAAAAAGAAAGAACAAGAAGAAGAATGAAACTTCCAATGGATCAAACCCTAGATCCTCTATACTTGAAGACTATATCAAAAAAACCGTCACTACCGCAATTACCAACATACCCTCTTCCACTCATAATACACTCTCCCAAAAGCTTGAAGAAAATCTTTCAAACCCTAACCCTAACCCTATGTTCAATGAACTACCCTTTGATTCATTTTCTAATGAATATTTGGAGTTTTTTCAAGGTAACATTGTTGATGATGTGGATGGGAGTGGACTTGTTAATTCAGTGCAATGTCCAAATTACAACAAGATGCACTTGGGTTATGAGACTACTCCAACTAATCATATAAATAATTTACTTTCTTATGATCTCTATCTCTCTCAATTGTTGAATTCATAG 1035 0.3575 MFGNENINTNDPFMDRSLYGQMIHYPNHQENNASVFPYSYGSNYDEFMWPNTQESSFVVDHGVLPNEEALKWTNFNQTSTLCLKDTNGYGESTKIVGRNTKKEKDNSMVLIKGQWTDEEDRKLIRLVKENGERKWTQIAEKLEGRVGKQCRERWHNHLRPDIKKDSWSEEEEKILVAMHEKIGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSKRKNKKKNETSNGSNPRSSILEDYIKKTVTTAITNIPSSTHNTLSQKLEENLSNPNPNPMFNELPFDSFSNEYLEFFQGNIVDDVDGSGLVNSVQCPNYNKMHLGYETTPTNHINNLLSYDLYLSQLLNS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1367 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 162 IPR017930 -
Psa2g1367 344 CDD SANT 166 209 IPR001005 -
Psa2g1367 344 Pfam Myb-like DNA-binding domain 115 173 - -
Psa2g1367 344 Gene3D - 111 163 - -
Psa2g1367 344 ProSiteProfiles Myb-like domain profile. 159 209 IPR001005 -
Psa2g1367 344 SUPERFAMILY Homeodomain-like 111 205 IPR009057 -
Psa2g1367 344 SMART sant 163 211 IPR001005 -
Psa2g1367 344 SMART sant 111 160 IPR001005 -
Psa2g1367 344 CDD SANT 115 158 IPR001005 -
Psa2g1367 344 MobiDBLite consensus disorder prediction 197 234 - -
Psa2g1367 344 ProSiteProfiles Myb-like domain profile. 112 158 IPR001005 -
Psa2g1367 344 PANTHER MYB TRANSCRIPTION FACTOR 21 343 - -
Psa2g1367 344 Gene3D - 166 234 - -
Psa2g1367 344 PANTHER MYB PROTEIN-RELATED 21 343 - -
Psa2g1367 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 163 213 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1367 Psa-Chr2 103652713 103654102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1367 110 343 MYB Transcription Factor Family AT5G11050 52.652 6.37e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Psa2g1367 Myb_DNA-bind_6 1.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1367 K09422 - aprc:113874412 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1367 2 103652713 103654102 Psa2g1367 2 103652713 103654102 ECH