Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1354 ATGAGTTTTTTCTCTGAGGCTACTTCGCGACCGATATTTCCAAGTATGAATGTGAATGAAGATTTGGAGAACAAGGTTGATTCGGTAGAGAACATTTCATCAGGTTCAATTGTGAGAAAGAAGTCAGATATTGTTTTGGTGACAAATAATGTTCGGTTTCAAATAGTTAGAAATGTGATGAGAAATGTGAAAGAGGTGATGTTGGGTACTAAGCTTGTTGTGCTTTTTCCGGCGGTTCCTTTGGCTGTTGCTGCGGATTTTTATAGCCTTGGAAGGCCTTGGATTTTTGCTTTGAGCCTACTTGGACTTGCTCCCCTAGCTGAACGAGTCAGCTTCCTCACTGAGCAAATTGCATATTTCACTGGCCCAACAGTTGGAGGACTTCTAAATGCAACTTGTGGCAATGCAACCGAGATGATCATAGCAATATTAGCACTTCATCAAAACAAAATTCATGTTGTCAAGTTCTCCTTGCTTGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTAGGCAGCTCACTCCTTTGTGGTGGCTTAGCAAATCTCAAAAGGGAACAAAGATATGACAGAAAACAAGCTGATGTGAACTCATTGCTTTTGTTGCTGGGATTTCTATGTCATTTGCTGCCATTAATGTTCAAATATGCCTTGGCGGGAGGAAATCATTCTATTGCCAATTGTACTCTTCAATTGTCGAGAGCGAGTAGCATTGTTATGCTTATAGCATATGTTGCATATATCTTCTTCCAATTGAAAACTCATCGAAAAATATTTGATGCACAAGAGGTGATTAATACTAATTATGAGATGGAAGATGAAGAAGATGAAGAGAAAGCAGTGATAGGGTTTTGGAGTGCATTTAGTTGGTTGGTGGGTATGACATTGGTCATATCTGTGCTTTCTGAATATGTTGTGGGAACCATTGAGGCTGCTTCAGATTCTTGGGGAATTTCTGTGAGCTTTATTAGCATCATTTTGCTACCAATTGTTGGGAATGCTGCAGAACATGCTGGGTCAGTCATATTTGCTTTCAAGAACAAGTTGGACATATCATTAGGTGTTGCTATGGGATCTGCTACTCAAATTTCAATGTTTGTGGTTCCATTCAGTGTGATCGTTGCGTGGATAATGGGTATACGAATGGATCTAGACTTCAATCTTCTTGAAACTGGATGTCTTGGTTTCGCAATTATTGTTACAGCCTTCACTTTGCAGGATGGAACTTCACACTACATGAAAGGAGTCATCCTTACTTTCTGTTACGTTATCATTTCTGCATGCTTTTTTGTTCTCAAAGCTCCACAAATCAATCAATATGGTATAATCGATTTCGAAGCAAACAACCCTGTCAAGCCATCTCCAATTGAATGA 1371 0.3953 MSFFSEATSRPIFPSMNVNEDLENKVDSVENISSGSIVRKKSDIVLVTNNVRFQIVRNVMRNVKEVMLGTKLVVLFPAVPLAVAADFYSLGRPWIFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIAILALHQNKIHVVKFSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGFLCHLLPLMFKYALAGGNHSIANCTLQLSRASSIVMLIAYVAYIFFQLKTHRKIFDAQEVINTNYEMEDEEDEEKAVIGFWSAFSWLVGMTLVISVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSVIFAFKNKLDISLGVAMGSATQISMFVVPFSVIVAWIMGIRMDLDFNLLETGCLGFAIIVTAFTLQDGTSHYMKGVILTFCYVIISACFFVLKAPQINQYGIIDFEANNPVKPSPIE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1354 456 TIGRFAM caca2: calcium/proton exchanger 58 429 - -
Psa2g1354 456 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 26 439 IPR004713 GO:0006812|GO:0008324|GO:0016021
Psa2g1354 456 TIGRFAM cax: calcium/proton exchanger 77 429 IPR004798 GO:0006816|GO:0015369
Psa2g1354 456 Pfam Sodium/calcium exchanger protein 286 425 IPR004837 GO:0016021|GO:0055085
Psa2g1354 456 Pfam Sodium/calcium exchanger protein 94 251 IPR004837 GO:0016021|GO:0055085
Psa2g1354 456 PANTHER VACUOLAR CATION/PROTON EXCHANGER 26 439 - -
Psa2g1354 456 Gene3D - 278 429 IPR044880 -
Psa2g1354 456 Gene3D - 123 266 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1354 Psa-Chr2 103192444 103196372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1354 28 435 Antiporters AT2G38170 67.153 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1354 K07300 - gmx:100816844 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1354 2 103192444 103196372 Psa2g1354 2 103192444 103196372 ECH