Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1322 ATGTCTTGCTCCGTCGCAGTTTCGAATTCGCCGGTGTTTTCTCCTTCATCGTCTCTCTTCTGTAAACAATCATCAATCATCTCGAACTCTGAATCATTAACGTTATCTCTATCTCATCTCAAACCGAATAACTCATCATCAACCACGTCGTCTCCGTCTCCGTCTTCTTCTCCTTCTTCTCCTTTTTATCTCCGACTACCGAAACTACCCTCGGTGTTCTCAACTTCATCCTCAAGTAACTCTACTTCTCAAAACGATGCTGTTTTGAAAAGGAAGCGACCCACGAGACTTGATATACCTGTTTCTTCTCTGGGATTTGGAGTTCCGGCGACACCGTCTGCGGTGGCGCGTGATGTTGTGGAGGCTGAAGGAGATGGGTATTCGGTTTATTGTAAGAGAGGGAGGAGGGAGTATATGGAAGATCGTTACACTGCTGGGGATAATCTTCGCGGAGAAAGCAATTTGAAATGTAATCTTATTGTATCTAACGCTGGTGATTGCCGTGCTGTCATTAGTAGAGGAGGGGTTGCAGAGGCCCTAACATCTGATCATCGACCTTCCAGGGAAGACGAACGGGAAAGAATTGAGACCTCGGGTGGTTATGTTGATTTATGCCGCGGAGTTTGGCGGATTCAAGGATCTCTGGCTGTATCTAGAGCTATCGGAGACCGACACCTGAAACAATGGGTGACTGCAGAGCCTGAAACTAAAGTTATCAGCATTGAACCCGAACATGACTTGTTAATATTAGCATCAGACGGTTTATGGGATAAGGTTAGTAACCAAGAAGCAGTAGACATTGCTCGTCAATTTTGCGTAGGAAACAACGAACAACGACCATTGCTGGCATGTAAAAAGCTTGCAGAATTGTCTGCTTCGCGAGGCTCGTTGGATGATACGAGTGTTATGCTAATCAAATTGAAACATTATACTTAG 936 0.4509 MSCSVAVSNSPVFSPSSSLFCKQSSIISNSESLTLSLSHLKPNNSSSTTSSPSPSSSPSSPFYLRLPKLPSVFSTSSSSNSTSQNDAVLKRKRPTRLDIPVSSLGFGVPATPSAVARDVVEAEGDGYSVYCKRGRREYMEDRYTAGDNLRGESNLKCNLIVSNAGDCRAVISRGGVAEALTSDHRPSREDERERIETSGGYVDLCRGVWRIQGSLAVSRAIGDRHLKQWVTAEPETKVISIEPEHDLLILASDGLWDKVSNQEAVDIARQFCVGNNEQRPLLACKKLAELSASRGSLDDTSVMLIKLKHYT* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1322 311 SMART PP2C_4 116 305 IPR001932 -
Psa2g1322 311 ProSiteProfiles PPM-type phosphatase domain profile. 76 307 IPR001932 -
Psa2g1322 311 PANTHER PROTEIN PHOSPHATASE 2C 3 153 IPR015655 GO:0004722|GO:0006470
Psa2g1322 311 PANTHER PROTEIN PHOSPHATASE 2C 157 310 IPR015655 GO:0004722|GO:0006470
Psa2g1322 311 Pfam Protein phosphatase 2C 158 299 IPR001932 -
Psa2g1322 311 CDD PP2Cc 159 307 IPR001932 -
Psa2g1322 311 MobiDBLite consensus disorder prediction 39 60 - -
Psa2g1322 311 MobiDBLite consensus disorder prediction 74 94 - -
Psa2g1322 311 Gene3D - 116 311 IPR036457 -
Psa2g1322 311 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 153 - -
Psa2g1322 311 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 157 310 - -
Psa2g1322 311 MobiDBLite consensus disorder prediction 74 88 - -
Psa2g1322 311 SUPERFAMILY PP2C-like 127 309 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1322 Psa-Chr2 100081924 100083623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1322 158 309 PP2C-type Phosphatase Gene Family AT1G07160 74.510 1.85e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1322 K17506 - pop:7487810 280.796