Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1317 ATGGAGGTTGACGGTGATACGAGTGTTGGAAATCGAAAACGGAAAAGAGGGGCGTTGAAAACAAAGCTTCTTGTCAATGAAAAAGTTGAGCTGAGGAGTTTGGAAGATGGTTTTCTGGGATCATGGCATCCGGGGAAAATTATCCGCCGTGCAAGGACTAAGCGTTATGTTAAATATGACAACATTCTAAATGACAATGAATCGGATTACATTGTTGAACTTGTGAGTGTTTCTAGTGTTTTGGATGGTGTTCTTGATTCTTCTTCTGCTTCAGATTGTGGTTACAGACGCGGACTCATTAGACCATTCCCGCCTCCAATCGGGTTAGAGATAATGGATCTTCCATTCGGACTTTGTATTGATGTGAATTATCAGGATGCTTGGTGGGAAGGTGTGATATTCGATCGCTGCAATGGAAAGGAGGAAAGGAGCATATTCTTCCCTGATTTAGGCGATGAAATGAAGGTTGGAGTTAAACAATTGAGAATCACTCAGGATTGGGATGAATCAACTGAGAATTGGTTACCAAGAGGGAAATGGGTGTTTCTTGAGTTGTTTGAGGAGTGTGAGAGGGTATCCTATGTTGCAATCTCGGTCAAACAGATTTGGTATGATGTTAGGATGAGAAAGGATTTTGCTGAAACCATTGGAGAATGGACTTGTAATGTGAAAGAATTGTGGAGAGGCCTTGTTGTGGAGGTAATTGGTGAGTACTATACCATCACGCTTAACGAGGTTCGGCCCGTCTTAAACCTTCCGAAGAATTTACTCGAAAGAGGGTCATCTGAACCAACTGATAATGTTCACATTGAAGCTAATCCTGGTAATGCGTCTGGTTCTGACGTTGGAACATCTGATAGGCCTAAGGAAAATGGTGATTCTTCAAACTTGTTGGATACAAATCAAAACTGTGGTGGGACTAGCAGGATTCCTTTGGTGGATGGGAACTGTGAGAAGCAAATTATTTTACATGAAGAGCTTGAATCAGATAAGAATCGAAAACGGAAACGTTCTACGTCCATAATTTGGAATCCTCTGAGACTGTCTGAAGTTGAATTCTGTCCTGAAGTTATTCATGAGTATGCACTTGGATGTAGGAGCAAGACGGTTCGGGAAACTTTGAAGACGAAAGTGAGGAAACATCTTGCATTTCTTGGTTGGACAATTGAGTGGACCGAAACCAAATGTTCTAAAAATAGACGATTCCGGTACATTTCACCGGATATGCGTGACCAGAAGTGTTACACTTCGATTTTTCAAGTTACTCAAGTTTTCCAAGAGGATCCCAACATGAACTCTGTGCTGCCCCAGATTGACAGAAATCTATCACATCCGGTCTCTGAACCACCCCGAATGAACAATGATTTATATGTTTGTCCTCCAACCACTGAGCCTTCTCCAGCAGTTAAACTTCAACTTGAACCAGAATTCTGTCCTGTAGCCGTCGTGAAATATTACTTGTACGCATTAGAGAGAAACTCGGCTGAGAAGAGAGAGTGGAAATTGAAGGCGAAGAAACATCTGTTAGCAGAAGGATGGATCTTTGACTACCCAACTGGAAGAAGGAAGGCAACTTTGTACAGGTCTCCACGAAATCATGGTTTACACACACTTCAAGGTGCATGCAGGCTGTACGTTAAAGAAAAAATTCCTGAATGGACTGATTCAGATCATGTTGATGGTGATGATCTAATGCTGACTGTGTTCCAATTGCTTCAAGAAGAGCCTGAATTACAAACTATAGAGGATCCATCAAAAACTGCAAGGAGAAACCGTAAAGGCGCAAAGGCTTCAAAGAGTAGTGCACAAAAGAATCTAGAGAAAGAAGTACCTGACCGTAAAGGCGCAAGTACTTCAAAGGCTAGTGCAGAAAAGGATCAAGAGAAGGAAGAACTTACTCGGGTGCTAAGATCAAGCAAAAGGGTGCAGAAGGTTTTGGGTTTGTCACATCAAAAGCCTCAAAATATTCTGTCTTGGTTAATAAATTGCAAAATTGTGTTGCCAAGATACAAGGTCTATTACTGGGAAACAGAAGGCAGAAACTCACCTACATTTGAGGGAAGGATTACTCTAGAAGGAATTAAGTGCTCATGTTGTCAGAATATGTTTGGACTCAGTGGCTTTGCAAACCATGCTGGTGGAAGCAGTAACTGCAGGCCTTCGGCGTGTATCTTTTTGAAAGATGGTAGGTCACTGTTAGATTGCATGAGGGAAGTAATGCACGATCACAGGTCAAGGGAAGCCAACGAGAAACCATGCTATAATCTGTTTGATGGTGAAAATGACAACATTTGTTCTGTTTGTAACTATGGTGGTGAACTTATTTTATGCGACCAATGCCCCTCGTCGTTTCATAAGAAGTGTCTTAATTTGGAGGGCATCCCTGATGGTGATTGGTTTTGTCCATCATGCCGTTGCCGGATTTGCGGCCAAAACAAAATTGAAGAGACAGAGGATCAACTTTTTCTTACTTGCATTCAGTGTGAACATAAATATCATGTTGAGTGCCTCAGAAATAGAGCAAAAGATAACTCGAGACGATACATGAAAAATTGGTTCTGCAGAGAAGAATGTGAAAGGGTCTATATCGGGCTCCAAAATCTATTGGGAAAGCCGGTTTTAGTGGGCGAGGACAATCTAACTTGGACATTGGTGAAGTATGCCAACTCTGAGAGCTGTGGTGTTGGCAGTGCTGAAAATGATCTAGTGGCAGAGAGTTACAGCAAACTCAGCATTGCACTTTCGGTGATGCATGAATGTTTTGAACCCTTACATAACCCCTTCTCTAGCAGAGATATCGTTGAAGACGTTATATTTAACCAAAGGTCGGAGCTCAACCGGCTAAACTTCCAGGGTTTCTATACTGTACTTCTAGAGAGGAATGAAGAACTAATCAGTGTGGCTACTATAAGGATATTTGGAGACAAGGTAGCTGAAGTTCCTCTAATCGGTACCAGATTTCAGTATAGACGACTCGGAATGTGTCGTGTTTTAATGGATGAGCTTGAGAAGAAGCTAAAGCATCTGGGAGTGGAGAGACTAGTCTTACCAGCTGTTCCTGGTGTACTAGAAACATGGACCAATTCTTTTGGTTTCAAGCAGATGACTAATTTCGAGAGATCACAGTTTATAGACTATTCTTTCCTAGACTTTCAGGGAACTACCATGTGCCAGAAACTGTTAACAAGACTACCGTCTCCGGAATCGGGCGTAACAAGAGACAATACTCCAAAACAACAAGACCTTGGCCTTGGATTCTCTGTGAAATGTAGAATTAATTTTGAAAAACCTAGTCCAGGATCAGAAGTGGATCAAGCAGAAAGGACTGGAAAAAGTGGATTAATGGATTTACAAGTTTGGAGACCTATGCCTAGTTCCTAA 3381 0.4182 MEVDGDTSVGNRKRKRGALKTKLLVNEKVELRSLEDGFLGSWHPGKIIRRARTKRYVKYDNILNDNESDYIVELVSVSSVLDGVLDSSSASDCGYRRGLIRPFPPPIGLEIMDLPFGLCIDVNYQDAWWEGVIFDRCNGKEERSIFFPDLGDEMKVGVKQLRITQDWDESTENWLPRGKWVFLELFEECERVSYVAISVKQIWYDVRMRKDFAETIGEWTCNVKELWRGLVVEVIGEYYTITLNEVRPVLNLPKNLLERGSSEPTDNVHIEANPGNASGSDVGTSDRPKENGDSSNLLDTNQNCGGTSRIPLVDGNCEKQIILHEELESDKNRKRKRSTSIIWNPLRLSEVEFCPEVIHEYALGCRSKTVRETLKTKVRKHLAFLGWTIEWTETKCSKNRRFRYISPDMRDQKCYTSIFQVTQVFQEDPNMNSVLPQIDRNLSHPVSEPPRMNNDLYVCPPTTEPSPAVKLQLEPEFCPVAVVKYYLYALERNSAEKREWKLKAKKHLLAEGWIFDYPTGRRKATLYRSPRNHGLHTLQGACRLYVKEKIPEWTDSDHVDGDDLMLTVFQLLQEEPELQTIEDPSKTARRNRKGAKASKSSAQKNLEKEVPDRKGASTSKASAEKDQEKEELTRVLRSSKRVQKVLGLSHQKPQNILSWLINCKIVLPRYKVYYWETEGRNSPTFEGRITLEGIKCSCCQNMFGLSGFANHAGGSSNCRPSACIFLKDGRSLLDCMREVMHDHRSREANEKPCYNLFDGENDNICSVCNYGGELILCDQCPSSFHKKCLNLEGIPDGDWFCPSCRCRICGQNKIEETEDQLFLTCIQCEHKYHVECLRNRAKDNSRRYMKNWFCREECERVYIGLQNLLGKPVLVGEDNLTWTLVKYANSESCGVGSAENDLVAESYSKLSIALSVMHECFEPLHNPFSSRDIVEDVIFNQRSELNRLNFQGFYTVLLERNEELISVATIRIFGDKVAEVPLIGTRFQYRRLGMCRVLMDELEKKLKHLGVERLVLPAVPGVLETWTNSFGFKQMTNFERSQFIDYSFLDFQGTTMCQKLLTRLPSPESGVTRDNTPKQQDLGLGFSVKCRINFEKPSPGSEVDQAERTGKSGLMDLQVWRPMPSS* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1317 1126 SMART agenet_At_2 112 169 IPR014002 -
Psa2g1317 1126 Pfam Acetyltransferase (GNAT) family 946 1031 IPR000182 GO:0016407
Psa2g1317 1126 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 900 1053 IPR000182 GO:0016407
Psa2g1317 1126 Pfam PHD-finger 764 806 IPR019787 -
Psa2g1317 1126 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 756 806 IPR013083 -
Psa2g1317 1126 SMART ring_2 765 804 IPR001841 -
Psa2g1317 1126 SMART ring_2 806 861 IPR001841 -
Psa2g1317 1126 MobiDBLite consensus disorder prediction 602 634 - -
Psa2g1317 1126 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 807 861 IPR013083 -
Psa2g1317 1126 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 947 1048 IPR016181 -
Psa2g1317 1126 Gene3D - 916 1046 - -
Psa2g1317 1126 SUPERFAMILY FYVE/PHD zinc finger 749 805 IPR011011 -
Psa2g1317 1126 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 1121 - -
Psa2g1317 1126 Pfam Tify domain binding domain 687 738 IPR032308 -
Psa2g1317 1126 SMART PHD_3 764 805 IPR001965 -
Psa2g1317 1126 SMART PHD_3 806 858 IPR001965 -
Psa2g1317 1126 ProSiteProfiles Zinc finger PHD-type profile. 762 807 IPR019787 -
Psa2g1317 1126 MobiDBLite consensus disorder prediction 261 300 - -
Psa2g1317 1126 MobiDBLite consensus disorder prediction 580 634 - -
Psa2g1317 1126 Pfam Agenet domain 27 105 IPR008395 -
Psa2g1317 1126 CDD NAT_SF 956 1016 - -
Psa2g1317 1126 PANTHER PHD ZINC FINGER PROTEIN 9 1121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1317 Psa-Chr2 99817995 99823855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1317 23 1004 PHD Transcription Factor Family AT5G58610 37.313 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Psa2g1317 Acetyltransf_1 0.00017 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1317 - - gmx:102661511 1329.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1317 2 99817995 99823855 Psa2g1317 2 99817995 99823855 ECH