Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1276 ATGGGCGTTTGGACCAAATTAAACTCACCCCAAAACCCCAAGCTCAGTATACCGGTACTCACGCTATTGTTGGTAGATACACCCCTGGTACATTCACCAATCAATTTCAAGCTTCGTTCAGTGAGCCCCGACTTCTTTTCTTCACTAACCCAAGAACCGATCACCCGCCAATCAAGGAAGTTGCTTTTAGATATAAATGATTCCGAATATGGTGTCGGTCCCTGCTCTGCAGGAGCTACCGCTGTATTAGATTTCATTGCAGAAGTCCTTTCTGAATTTGTGACAGAACAGGTGAAAGCATCACAACTTATAGAGAACATCTTGGAAAGTGTTCCTCTATATATCGATAGTGAATCTGTGTTGGTTTTCCAAGGGATGTGTCTTGGGAGTGGACCAGATGGTAGAATTGAAGAAGCTGCTCCTGCTGGAAAGAGGCTCTTATCAGTTGGAAGAGGAATTAGTATAGGGGAAGATGATCTCCTTTCACGAGCTACCGCTGTATTAGATTTCATTGCAGAAGTCCTTTCTGAATTTGTGACAGAACAGGTGAAAGCATCACAACTTATAGAGAACATCTTGGAAAGTGTTCCTCTATATATCGATAGTGAATCTGTGTTGGTTTTCCAAGGGATGTGTCTTGGGAGAAGTTTGTCAGAGTTTTCTGAGTGGTATCAGAATACTGAACAGATTGTGAATAAGGTATTTGAGCAGTGTGCTCGCATTATGTGGGTACAGTATATTGCAGGATCAACAAAGTTTCCAGGAGTAAGAATCAGAGGGATATCAAGATGCTGTAGAAGAGTAAAATCCATAATAGTAAAGCAAGGTGGTGGTGTTGGAATGATACTTATTGACCATAATGCCAAAGAAGTCGGTTTTCAGTTTGTCATCCCAAGCACTCTTATTGGCCAAGATGCTGTAGAAGAGCTTCAAGCATACATAAACACAGATAAGAACCCCATTGCTAAAATCTACCCAAAAATAACTGTTATTGTTACCAAACCTGCTCTAGAAGCAGCAGCTTTCTCTTCCATGGGGCCAAATATAATAACACCAGATATTATCAAGCCTGATATCACAGGACTTGGACTGAATACTCTGACAGCATGGTCTCCGGTGGCTACGGAAGCCACAGTTAAACAACGATCTGTCGACTATAACATCATATCAGGAACATCAATGTCTTGCCCACACATATCCGCTGTTGCAGCAATTATCAAATCTTCCCTTCCCGAGGCTGTTGAAGCATGTATTGATGCTGCAGTGCGCAGCCTTGAGATCGGCATTCCTCTTAGTATTCAGCAATATATGTTGCTTACACCATCTGGGAAACCAACTGCACTTATCTTTGCTTCTGGCAAAATGGTTTGTACTGGAGCCAAGGGTGAGCAACAGTCTAAACTGGCAGCAAGGAAGTATGCGCGTATCATCAAAAAACTTGTTTTCCCGGCCAAATTTAAGGATTTCAAGATCCAGAACATTGTTGGCTCCTGTGATGTTAAGTTCCCGATACGGTTGGAGGGTCTTGCATGTTCCCATGGTGCTTTCTCTAGTTATGAAACAGAGCTGTTTCCCGGATTAATATTCCGTATGAAGCAACCGAAGATAGTCTTGCTTATTTTCATCTCTGGGAAAAATAGTTCTTACAGGAGCCAAGTTGTTGTACAGTTGGTTCTCAGGCCAGGTTCCTCTATATGCAATGTTGATGCTGATATCCAGTCTGGCGTGATGGCGACAAAAAGAGACTGTCATCCTGAGTTGCTTATATCTACTAATAACCTCAAAAGCCGAAACATGGCCGAAGTTCAAAGAGTTTCATGCAGTTATGATAATTCTAAAGTTTTGACATGCATTCTTGAACGCGTGGAGAACGATCTTCACTTCTCTGCAAAGGTGTCTCTAGCTGATTACGTTCTAAGTGTTGTTGAAAAGGAAGTAAACCTAACTCAATTTGCACGTCTTCACCTGGAAACCGAATGTCTAATGTTTTCTCAAAAAGCATTTCAAGAATTGTGTGGACATTTAATTGATGTGGTTGATGAAGAGGAGTTTGGTGACATACCACCTGGATTTGAAAAGAACTCTCAAATAATATTCCCTCCCTACAACTCAAAATTTCGACCTTCAAGAATAGTTGAATGTAATCCCAAGATTACAGAGTATGTTGCAGTTGCACTGTGCAGACAGAAGCTGCATGATGAAGTCTTAGAGAAGTGGAAGTTGTCAATTCTTGATGCTACATTTAAGCAGGTTCTCACGTCATCATCTGTTAACACCCAGCAAATTCATTCAAGCACTTCTGGAAATGCCATGATTTTGTCTTCGGATGTTCATGTTTTGCCCGAAGCTCCGGTACCAGATACTGAGATCAAGCCAAATGATTTGCCTTCTCATAATGGTTTTGAACATGTCCATGCTGTAATACCCGCTCCATTGCTTGCTGAAGTAGTAGACAGGATGCCCATTTTGTATCAGTATTACACACACTCCATTTCTTCAGCTCTCCTCCGCCGCTCTTGTTACAACCTGAAAGGTTGCAACCGGAATCGTCACATCACAACTCGACGTTCTTCTGGCAACAACAACAGCATTCGATCCAGTTCCGTCACCGAGTTCCGTTACCGGCAGCAACAACAACGCAAAGCGGTAGCAACCTTGGTATTTCGGTAA 2670 0.4221 MGVWTKLNSPQNPKLSIPVLTLLLVDTPLVHSPINFKLRSVSPDFFSSLTQEPITRQSRKLLLDINDSEYGVGPCSAGATAVLDFIAEVLSEFVTEQVKASQLIENILESVPLYIDSESVLVFQGMCLGSGPDGRIEEAAPAGKRLLSVGRGISIGEDDLLSRATAVLDFIAEVLSEFVTEQVKASQLIENILESVPLYIDSESVLVFQGMCLGRSLSEFSEWYQNTEQIVNKVFEQCARIMWVQYIAGSTKFPGVRIRGISRCCRRVKSIIVKQGGGVGMILIDHNAKEVGFQFVIPSTLIGQDAVEELQAYINTDKNPIAKIYPKITVIVTKPALEAAAFSSMGPNIITPDIIKPDITGLGLNTLTAWSPVATEATVKQRSVDYNIISGTSMSCPHISAVAAIIKSSLPEAVEACIDAAVRSLEIGIPLSIQQYMLLTPSGKPTALIFASGKMVCTGAKGEQQSKLAARKYARIIKKLVFPAKFKDFKIQNIVGSCDVKFPIRLEGLACSHGAFSSYETELFPGLIFRMKQPKIVLLIFISGKNSSYRSQVVVQLVLRPGSSICNVDADIQSGVMATKRDCHPELLISTNNLKSRNMAEVQRVSCSYDNSKVLTCILERVENDLHFSAKVSLADYVLSVVEKEVNLTQFARLHLETECLMFSQKAFQELCGHLIDVVDEEEFGDIPPGFEKNSQIIFPPYNSKFRPSRIVECNPKITEYVAVALCRQKLHDEVLEKWKLSILDATFKQVLTSSSVNTQQIHSSTSGNAMILSSDVHVLPEAPVPDTEIKPNDLPSHNGFEHVHAVIPAPLLAEVVDRMPILYQYYTHSISSALLRRSCYNLKGCNRNRHITTRRSSGNNNSIRSSSVTEFRYRQQQQRKAVATLVFR* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1276 889 Gene3D - 436 487 IPR012295 -
Psa2g1276 889 PANTHER TATA-BOX BINDING PROTEIN 444 545 IPR000814 GO:0003677|GO:0006352
Psa2g1276 889 SUPERFAMILY TATA-box binding protein-like 484 545 - -
Psa2g1276 889 SUPERFAMILY Subtilisin-like 326 418 IPR036852 GO:0004252|GO:0006508
Psa2g1276 889 CDD PA_subtilisin_like 266 324 - -
Psa2g1276 889 Pfam Transcription factor TFIID (or TATA-binding protein, TBP) 488 545 IPR000814 GO:0003677|GO:0006352
Psa2g1276 889 Pfam Transcription factor TFIID (or TATA-binding protein, TBP) 443 480 IPR000814 GO:0003677|GO:0006352
Psa2g1276 889 ProSitePatterns Serine proteases, subtilase family, serine active site. 391 401 IPR023828 -
Psa2g1276 889 Gene3D Peptidase S8/S53 domain 333 422 IPR036852 GO:0004252|GO:0006508
Psa2g1276 889 Gene3D - 488 620 IPR012295 -
Psa2g1276 889 SUPERFAMILY TATA-box binding protein-like 442 490 - -
Psa2g1276 889 Pfam Subtilase family 328 413 IPR000209 GO:0006508|GO:0008236
Psa2g1276 889 Gene3D - 269 332 - -
Psa2g1276 889 PANTHER TATA-BOX-BINDING PROTEIN 1 444 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1276 Psa-Chr2 96915388 96921980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1276 259 446 Subtilisin-like Serine Gene Family AT5G67360 42.929 1.57e-32 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1276 - - gmx:106794255 235.728