Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1275 ATGTCTCTCAGTTTATCTAAGCAGACTCACTTCGGATTCGAAGTTGATCTTTTATATTTTTTCTGCGGGTATCTAACTTTACAACTCATGAAGATTAAATTGTTGTTAGTCGTTGTGGGAGTGATTTTCAGTTATTTTCTCATCATCCTTCGTTTTTATTTGGGCAACCAAACCGAAATTGTGCATCGTAGACTCCAAATCCATGACCCTCATGCTGTAGTCATTCAAGTCCGGGCAGATTCAGAAAGTGCTCCATTTATGAATTCTAATGCTCTACGAGAAAACACAGATTTCGAGCCAGTCACTCAAGTCATTTTGCAATCATTACAAGACACTAGTGATAGTGATCAAGATTGCCTCACACTTGGTGATTGTAAAAAAGTTATAGTCAAGACGAATGAGAAGCTTAATCAATTGATTTGGAAGCGAGTTATAATGAAAGAGAAAATAGTCCTTCCGGACAACTATATTTCCATGAAAACTTTGAGGATCAAAGAGATGGAAGAGATTGCGGATTACCTACACAAAACAGTGAAGAACATGGTTGATGTCGAGTTCATCTCAGAGTGTTGCAACATGTACAACATTTTTCGAAGCAAATTCATCAACAGGTGTCTCTGTAGACTTGGTCTGCAGGAGGTCAATTTGTGTAACCCTGAGAATGAGAATATTAAAAGTTTGATTAGAGCTCTTCACATAGCTCTAAATACACTTCTTCCTAATGAGAGAATGACCTGGCATCGCGTCTTTTCTGGATTCTCCACAAAGTACTGCATTTTTTCCTCGTCAGAGTGGATGAGATTAGAAATAGAATTGTGGGCCAAACTATTAGTCTTGGAGACTTGTATGTACTCCAATTCTCAAAAGAAGGTTAAATTTGGTTTCGGGGTTCATCCGCTTACCCTCAGCTTAATGAACTGCATTGAAGAAGTTTCAGAAGATAGGAATAATATGGATTATATTCACATTCCTTGCATTATACAGTTATTACAGACTAATTTAGACGCAAGGTCTAAAACACACATAAACTCTACTTTAGGGCATCTTTTTATGCTAAATAACAATAGATATATACAAGTGGTGGGAAGACGCGATTCCTTGCGAACTCTTTTAGGAGATGATTGGACTCAACTACAAGGTTCAAAACTCAGACAAAACATTGGAGATTTTCTTAAAGGCGTGTGGAGAAAGGTTTTTAAATCAATGAACACTAAGTCAATTGGCCCCGAGGATGCTATCGCGACAATGAAATTGTTCAATCAAAACTTTTTAAACGTATGTGAGGCTCAGTCTACATGTTCTATACTCGATGTGAAGACAAGGAAATTTGTACAAAGGTATACCAAAAAGATATTCATGCCAAAATATGAAATTTTCATTGGGAGGTTCACGGATATTGTTGGAAAAGATGATGCGGATCAATATATTAACTATGGAATGTTAGACATAAGAGATAAATTCAATCATTTATATCTGGAAAGTGAGAAGAAGAATAAAAAGAAAAAGTATTGGCCTATTACACAATGTTCAACTTCTACCATGAAAACATAG 1551 0.363 MSLSLSKQTHFGFEVDLLYFFCGYLTLQLMKIKLLLVVVGVIFSYFLIILRFYLGNQTEIVHRRLQIHDPHAVVIQVRADSESAPFMNSNALRENTDFEPVTQVILQSLQDTSDSDQDCLTLGDCKKVIVKTNEKLNQLIWKRVIMKEKIVLPDNYISMKTLRIKEMEEIADYLHKTVKNMVDVEFISECCNMYNIFRSKFINRCLCRLGLQEVNLCNPENENIKSLIRALHIALNTLLPNERMTWHRVFSGFSTKYCIFSSSEWMRLEIELWAKLLVLETCMYSNSQKKVKFGFGVHPLTLSLMNCIEEVSEDRNNMDYIHIPCIIQLLQTNLDARSKTHINSTLGHLFMLNNNRYIQVVGRRDSLRTLLGDDWTQLQGSKLRQNIGDFLKGVWRKVFKSMNTKSIGPEDAIATMKLFNQNFLNVCEAQSTCSILDVKTRKFVQRYTKKIFMPKYEIFIGRFTDIVGKDDADQYINYGMLDIRDKFNHLYLESEKKNKKKKYWPITQCSTSTMKT* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1275 516 SUPERFAMILY Cullin repeat-like 128 491 IPR016159 -
Psa2g1275 516 Pfam Exo70 exocyst complex subunit 323 487 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa2g1275 516 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 492 IPR004140 GO:0000145|GO:0006887
Psa2g1275 516 PANTHER PROTEIN, PUTATIVE-RELATED 1 492 - -
Psa2g1275 516 Gene3D Exocyst complex component Exo70 99 263 - -
Psa2g1275 516 Gene3D Exocyst complex component Exo70 264 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1275 Psa-Chr2 96872628 96874891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1275 251 491 EXO70 exocyst subunit family AT5G58430 28.519 8.93e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1275 K07195 - cam:101511504 375.555