Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1274 ATGCCCATAAGAATATCCAATAGACTAATAAAGAAAAAGCTATGGAGAATATTAGGTTTTCTTTCAAGTATAGTTGGACTCATTTCTTATGCATTCAGCTCTTCTTTCAGTCATCTTTTTGGAGAGTGGAACTTCATCAAAATCGTTATTTACACTGTGGTAAGTTTCATTATCAGCAGCATGATGTTATTTTTGAAAAGATTGAAACTTTCAAGGAGATTCTTGCTGAAAGCTCATTTGGGTGTTCTTGTTTTGTTGCTAACATCTTTGTACTCTTTCGTGTCTGATAATAAAAATTTGAATGGGAAACCAGACCTCCTGAGTCTGATTTCGTGTGCAGCGTTTGCTTTAATGTCTTTTTGCCTTTCAAGACATATCGACCTTGGTTTTGAATCCGATCTCCTCAATTTCTTCCTTGGAATTTTTACTCTTCAATTGATGAAAATCAATTTGATGCTATCTATTGTTGCTGCAATCTTCTGTTATTCTCTTATGGTTCTTCGTTCTAATTGGGATTCTCGCCACGAAACTAGAAATTTGAGAGTGGAAAATGGTAGCGATCATCGTGATGTAGCCATAGATGTCAGTGTTTTAGATAATAGTAGCCAACAGAACCAGAACCAGTCTTTAAGCAGAAGGTTCGATCATGATGATGGGTATAATTGGAAAAAATATGAAGATAAATTAGCAAAAGGAAATGAAAATCAGAGAAGCTATTATAAATGTACTTGGCCTAATTGTGTTGTGAAGAAAAAAGTTGAGAGAACAATTGATGGAGAAATAATTGAGACGCTATACAAAGGTACACATAATCATTGTTGGCCTACTTCTATAAGGAAGAGGAACTCATCATCAGAATATCTTTATTCACTTTTGCCTTCGGATACTCGCCCGATTGATTTGCGAGATCAATCATTTCGCAGAGAAGAAGTGGATTTTGATGCAGATCATGAAAGCTCATCAATATCAATATGA 975 0.3508 MPIRISNRLIKKKLWRILGFLSSIVGLISYAFSSSFSHLFGEWNFIKIVIYTVVSFIISSMMLFLKRLKLSRRFLLKAHLGVLVLLLTSLYSFVSDNKNLNGKPDLLSLISCAAFALMSFCLSRHIDLGFESDLLNFFLGIFTLQLMKINLMLSIVAAIFCYSLMVLRSNWDSRHETRNLRVENGSDHRDVAIDVSVLDNSSQQNQNQSLSRRFDHDDGYNWKKYEDKLAKGNENQRSYYKCTWPNCVVKKKVERTIDGEIIETLYKGTHNHCWPTSIRKRNSSSEYLYSLLPSDTRPIDLRDQSFRREEVDFDADHESSSISI* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1274 324 Gene3D WRKY domain 200 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g1274 324 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 3 280 - -
Psa2g1274 324 SUPERFAMILY WRKY DNA-binding domain 213 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g1274 324 Pfam WRKY DNA -binding domain 217 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g1274 324 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 280 IPR044810 GO:0003700
Psa2g1274 324 ProSiteProfiles WRKY domain profile. 217 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g1274 324 SMART WRKY_cls 216 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1274 Psa-Chr2 96870306 96871280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1274 194 282 WRKY Transcription Factor Family AT1G13960 50.562 7.18e-24 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa2g1274 WRKY 2.6e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1274 - - ccaj:109792596 338.961