Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1273 ATGACTCCTATTTTCATCCAAATTCAGAGGTGGATGATGCATACAAAGGTGTGGAGATTTGTTGGCTTTGCATCATCTATTGTTGGATTGCTTTGTTATGCTCTAAGTTCTTCCTTCAACCATCTATTTGGAAATTGGAATTTGATGAATATATTTCTTTACACCATTTTCAGTTTCATCATTTGTCTAATTATTTTGTTTGCAAGAACATGGCAACACTCGACAAGTCTTCGATTCAAAGCTCGTTCAGCATTTCTGGTATTGACAATTACTTCCGTCTATTCTTTTTTCTCCGATAAAGTTATGAACGGAAAACCAGATGCGTATAGTCTTATTTCATGTGCTGCCTTTGCTATCATGTCACTCAGTTTATCAAGGCAAATTCAATGCGGATTTGAAGTGGATCTTATGTACTTTTATCTAGGATGTTTAATTGTACAACTCATGAAGTTTAATTTATTGTTAGCTATTGCTGGAGTCTGTTACAGCTACTGTCTTATTATTCTTCGCTCTTCTTTCACTTCCTTCGATGTGACACCAGAAAATCATTCTCTTGGACCCGAAGAACAACTAGTAGCCATTCAAGTTGATTCACAACAACGAGAAAATAGCAATAGTGGTTGCGTCCTGCAACACTTTTATACAGATTTGGAACGGTTGTTGCAACAGTTTCTAACATGTATGAAAGAGTTACAGAAAAACAATTCAAACATTGAGAAAATGCTTTTGGAAAAGGTGAAAGGTAACTATAAATTGGTAGTGGCTGACCACAACTTCATAATTGATGCACTTTCGCATGAAACAATTAATAACCTTCAAGAAACAGCAAAATTAATGGTTGATGCTGGATTTGAGAAAGTGTGCTACGAAGCTTACAACACTTTTCGTAACGAATGGTTGAAAGACTTACTAAAGAATAAGTTATTAAGATTGGGAAAGATTGGATTTCAAGATTACGTAATTGGAAGATGGATTAAAACTTCAGAGGTTGCTCTTAGAGTGTTATTTCCTAGTGAGCGTCGACTCTACAGTTGTGTCTTCTCGAATTCAACGTCTGCATCTTCTGATCTCCATTTCTCAGAGATATGTCACGGAGCAACGATTGAACTTCTGAATTTTGCAGATTCGTTTGCAAATCGAAGCCCCTCAGCGTGGCGTTTGTTTAAAATCCTCAACTTGTTGGAAACGCTGTGTGATCTAATTCCCGAATTTGAATCATTGTTCCATGATTCGTTGGTGAATGAAGCAATAAAAATCAAGAATAGATTGGGTGAAATATGTAGAGGCATTTTCATGGAATTTGGGGATATGATATTCCTAACATCGGAGGCGGAGTTTGATTGTTGGGTTGATGGTGGGGTTCATCCGATGACCTGCGCGGCCATTGGCTACACTGTTATGGCTTTTTGGTCAAGAAAGAACCTGGAGCAAATTTTAAGAGCACACCCCATGGTTGTTACTGATGCGGCGGAAACTTGTTTATTCTATTCGCAGATGGAGTTGATAATGGAGCAATTTGAGAGAAAACTAGAAACTAAGTCACAAGCTTATGGAGATCTTGCTTTGCGCTATCTTTTCATGATAAATAATCTATATCACGTTAAGAGCGGATTGGAGACTTTTTGGGATGACAGGTTTTGTATAAACATGAGGAAATACTTTGAACTCTATTGTAGAAGCTCTTGGAATAAGGTGATAAACATTTTGGAGATAGATATAAAAGAATCAGTGGTGCCTAATTCTAAAATAGATTCAATGATAAAAGACAAACTCAATCTGTTCAATCAGAAATTTAAGGAGATGTGTGGAATACAGTCTAAATGGCGTGTTTTTGATGAGCAGCTAAGGAAACAAATGATAATGTTCATAGAAAGCATTTTGTTGCCGGCATATGAAAACTTCATCAGTATGTTTCGGAATGTTGTTGGTAAAAACGAGGCTGACTATATAGAGTATGAAATGTCTGATATTCAAGATCAACTCAACAAGTCGTTTTTATTACAACATGTTTGTTGA 2016 0.3651 MTPIFIQIQRWMMHTKVWRFVGFASSIVGLLCYALSSSFNHLFGNWNLMNIFLYTIFSFIICLIILFARTWQHSTSLRFKARSAFLVLTITSVYSFFSDKVMNGKPDAYSLISCAAFAIMSLSLSRQIQCGFEVDLMYFYLGCLIVQLMKFNLLLAIAGVCYSYCLIILRSSFTSFDVTPENHSLGPEEQLVAIQVDSQQRENSNSGCVLQHFYTDLERLLQQFLTCMKELQKNNSNIEKMLLEKVKGNYKLVVADHNFIIDALSHETINNLQETAKLMVDAGFEKVCYEAYNTFRNEWLKDLLKNKLLRLGKIGFQDYVIGRWIKTSEVALRVLFPSERRLYSCVFSNSTSASSDLHFSEICHGATIELLNFADSFANRSPSAWRLFKILNLLETLCDLIPEFESLFHDSLVNEAIKIKNRLGEICRGIFMEFGDMIFLTSEAEFDCWVDGGVHPMTCAAIGYTVMAFWSRKNLEQILRAHPMVVTDAAETCLFYSQMELIMEQFERKLETKSQAYGDLALRYLFMINNLYHVKSGLETFWDDRFCINMRKYFELYCRSSWNKVINILEIDIKESVVPNSKIDSMIKDKLNLFNQKFKEMCGIQSKWRVFDEQLRKQMIMFIESILLPAYENFISMFRNVVGKNEADYIEYEMSDIQDQLNKSFLLQHVC* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1273 671 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 667 IPR004140 GO:0000145|GO:0006887
Psa2g1273 671 Coils Coil 214 234 - -
Psa2g1273 671 SUPERFAMILY Cullin repeat-like 221 663 IPR016159 -
Psa2g1273 671 Gene3D Exocyst complex component Exo70 206 669 - -
Psa2g1273 671 Coils Coil 496 516 - -
Psa2g1273 671 PANTHER PROTEIN, PUTATIVE-RELATED 8 667 - -
Psa2g1273 671 Pfam Exo70 exocyst complex subunit 323 662 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1273 Psa-Chr2 96867996 96870011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1273 254 665 EXO70 exocyst subunit family AT5G58430 40.000 1.30e-89 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1273 - - mtr:MTR_5g073960 588.571